The Human Disease – Week 3

Gene to Gene Network Analysis (bird’s eye view)

Abhinav Kumar https://www.linkedin.com/in/abhinavkumar2603/
2022-04-27

Data Description

This is a gene disease dataset set. This has been published by Carlos Castillo, a computer scientist based out o Barcelona Spain.The dataset has been used to teach network analysis to students at the university. The dataset was a result of the research conducted by Goh, K. I., Cusick, M. E., Valle, D., Childs, B., Vidal, M., & Barabási, A. L. (2007). “The human disease network”. Proceedings of the National Academy of Sciences, 104(21), 8685-8690. (https://doi.org/10.1073/pnas.0701361104). The effort here is to understand that many diseases may have common genetic origin. Hence, we want to find out which are those genes that may be connected by common among disorders. Therefore, here we will look Gene to Gene network. Below are the features of the data set:

  1. Disorder ID
  2. Disorder Name
  3. Comma-separated list of Genes
  4. The OMIM ID (Online Mendelian Inheritance in Man) of this disorder
  5. The location in the Chromosome
  6. A disorder Class indicating the physiological system that is affected

We will only use the below two features:

Using these two features a bi-partite adjacency matrix will be created which then will be converted to one to one mode (Gene to Gene) by matrix operation. The disorder name would be pivoted in the data set to get the bi-partite matrix in place.

library(readr)

urlfile = ("https://raw.githubusercontent.com/chatox/networks-science-course/master/practicum/data/disease-genes.csv")

geny = read_csv(url(urlfile))
knitr::kable(head(geny))
ID Name Genes OMIM ID Chromosome Class
1 17,20-lyase deficiency, isolated CYP17A1, CYP17, P450C17 609300 10q24.3 Endocrine
1 17-alpha-hydroxylase/17,20-lyase deficiency CYP17A1, CYP17, P450C17 609300 10q24.3 Endocrine
3 2-methyl-3-hydroxybutyryl-CoA dehydrogenase deficiency HADH2, ERAB 300256 Xp11.2 Metabolic
4 2-methylbutyrylglycinuria ACADSB 600301 10q25-q26 Metabolic
5 3-beta-hydroxysteroid dehydrogenase, type II, deficiency HSD3B2 201810 1p13.1 Metabolic
6 3-hydroxyacyl-CoA dehydrogenase deficiency HADHSC, SCHAD 601609 4q22-q26 Metabolic

Cleaning the Genes column in dataset

library(stringr)

# Genes is character column and we need to split each row into list of genes
# strsplit() will split the character to list of characters


geny$Genes <- strsplit(geny$Genes, split = ", ")


head(geny)
# A tibble: 6 x 6
     ID Name                          Genes `OMIM ID` Chromosome Class
  <dbl> <chr>                         <lis>     <dbl> <chr>      <chr>
1     1 17,20-lyase deficiency, isol~ <chr>    609300 10q24.3    Endo~
2     1 17-alpha-hydroxylase/17,20-l~ <chr>    609300 10q24.3    Endo~
3     3 2-methyl-3-hydroxybutyryl-Co~ <chr>    300256 Xp11.2     Meta~
4     4 2-methylbutyrylglycinuria     <chr>    600301 10q25-q26  Meta~
5     5 3-beta-hydroxysteroid dehydr~ <chr>    201810 1p13.1     Meta~
6     6 3-hydroxyacyl-CoA dehydrogen~ <chr>    601609 4q22-q26   Meta~
# creating a new dataframe

geny_new <- geny[, c(2,3)]
colnames(geny_new)[1] <- "Disorder"

head(geny_new)
# A tibble: 6 x 2
  Disorder                                                 Genes    
  <chr>                                                    <list>   
1 17,20-lyase deficiency, isolated                         <chr [3]>
2 17-alpha-hydroxylase/17,20-lyase deficiency              <chr [3]>
3 2-methyl-3-hydroxybutyryl-CoA dehydrogenase deficiency   <chr [2]>
4 2-methylbutyrylglycinuria                                <chr [1]>
5 3-beta-hydroxysteroid dehydrogenase, type II, deficiency <chr [1]>
6 3-hydroxyacyl-CoA dehydrogenase deficiency               <chr [2]>
# replicating rows for Genes having more than 1 gene per disease
library(tidyverse)
geny_new <- unnest(geny_new)
head(geny_new)
# A tibble: 6 x 2
  Disorder                                    Genes  
  <chr>                                       <chr>  
1 17,20-lyase deficiency, isolated            CYP17A1
2 17,20-lyase deficiency, isolated            CYP17  
3 17,20-lyase deficiency, isolated            P450C17
4 17-alpha-hydroxylase/17,20-lyase deficiency CYP17A1
5 17-alpha-hydroxylase/17,20-lyase deficiency CYP17  
6 17-alpha-hydroxylase/17,20-lyase deficiency P450C17
geny_new["count"] <- 1
admat <- geny_new %>%
  pivot_wider(id_cols = Genes, names_from = Disorder, values_from = count, values_fn = list(count = ~1))

# take out first column, make it column name:
admat2 <- as.matrix(admat[,-1])
rownames(admat2) <- admat$Genes

# now admat2 is the bipartite adjacency matrix

# it can stay NA, too
admat2[is.na(admat2)] <- 0


# this is now weighted, each cell will show how many disorders the genes share.
adj_mat <- admat2 %*% t(admat2)
library(statnet)
library(igraph)


network.stat<-network(adj_mat, directed=F, matrix.type="adjacency", ignore.eval=FALSE, names.eval="weight") 

print(network.stat)
 Network attributes:
  vertices = 3823 
  directed = FALSE 
  hyper = FALSE 
  loops = FALSE 
  multiple = FALSE 
  bipartite = FALSE 
  total edges= 6643 
    missing edges= 0 
    non-missing edges= 6643 

 Vertex attribute names: 
    vertex.names 

 Edge attribute names not shown 

The gene to gene network has below details:

Extracting vertex attribute values from statnet object

# Extracting vertex attribute values from statnet object

head(network.stat %v% "vertex.names")
[1] "CYP17A1" "CYP17"   "P450C17" "HADH2"   "ERAB"    "ACADSB" 

Extracting edge attribute values from statnet object

head(network.stat %e% "weight")
[1] 2 2 2 1 1 1

Summarizing numeric network attribute

summary(network.stat %e% "weight")
   Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
  1.000   1.000   1.000   1.642   2.000  11.000 

Classify all dyads in the network using statnet object

sna::dyad.census(network.stat)
      Mut Asym    Null
[1,] 6643    0 7299110

#Classify all triads in the networkusing statnet object

sna::triad.census(network.stat) 
            003 012      102 021D 021U 021C 111D 111U 030T 030C  201
[1,] 9279748342   0 25323442    0    0    0    0    0    0    0 7400
     120D 120U 120C 210   300
[1,]    0    0    0   0 14887

Global Transitivity

gtrans(network.stat)
[1] 0.857859

Identifying the Isolates in the network

isolates(network.stat)
  [1]    6    7   14   17   18   22   32   33   39   89  105  106  109
 [14]  119  131  145  156  197  202  203  204  205  225  226  227  273
 [27]  285  288  289  290  303  304  325  326  333  345  346  361  372
 [40]  381  382  383  389  390  391  395  415  424  479  488  504  519
 [53]  531  534  535  536  537  553  554  572  585  586  592  607  608
 [66]  609  610  621  629  636  644  647  656  661  668  674  679  683
 [79]  750  757  763  764  772  773  774  775  776  778  783  784  785
 [92]  786  808  809  813  825  866  874  881  915  928  940  975  978
[105]  979  982  995 1029 1036 1043 1044 1061 1077 1090 1091 1092 1117
[118] 1144 1167 1197 1211 1244 1254 1255 1278 1296 1328 1343 1344 1366
[131] 1375 1379 1390 1391 1398 1399 1450 1453 1480 1492 1519 1527 1535
[144] 1552 1556 1583 1586 1587 1593 1598 1599 1602 1610 1639 1655 1658
[157] 1669 1682 1687 1698 1702 1708 1711 1725 1752 1771 1788 1792 1793
[170] 1794 1795 1796 1799 1812 1815 1816 1822 1823 1824 1825 1830 1851
[183] 1888 1889 1890 1895 1896 1910 1911 1912 1913 1914 1919 1920 1921
[196] 1927 1939 1950 1974 1989 1994 1995 1996 2004 2012 2013 2018 2019
[209] 2024 2025 2026 2027 2028 2029 2036 2037 2045 2056 2057 2058 2059
[222] 2062 2086 2087 2104 2105 2108 2109 2112 2125 2128 2133 2173 2174
[235] 2183 2184 2185 2187 2188 2217 2224 2227 2230 2231 2254 2262 2273
[248] 2279 2291 2294 2314 2315 2332 2333 2354 2364 2370 2371 2386 2402
[261] 2406 2427 2437 2446 2450 2456 2469 2472 2473 2478 2481 2515 2521
[274] 2529 2542 2565 2566 2580 2581 2582 2603 2612 2615 2628 2636 2637
[287] 2650 2651 2673 2702 2706 2707 2731 2751 2781 2782 2783 2784 2789
[300] 2790 2791 2796 2809 2814 2823 2824 2844 2851 2863 2878 2928 2935
[313] 2939 2948 2966 2971 2974 2987 2990 3041 3050 3059 3070 3071 3072
[326] 3086 3087 3099 3105 3119 3122 3161 3211 3212 3237 3244 3248 3249
[339] 3250 3251 3258 3264 3276 3279 3287 3291 3292 3310 3319 3327 3340
[352] 3349 3357 3358 3363 3364 3384 3395 3407 3417 3418 3430 3431 3434
[365] 3435 3446 3447 3467 3470 3471 3472 3473 3482 3486 3494 3496 3507
[378] 3525 3528 3529 3532 3542 3551 3566 3585 3600 3608 3612 3616 3617
[391] 3622 3639 3651 3652 3656 3657 3660 3668 3669 3674 3675 3689 3690
[404] 3714 3715 3726 3738 3748 3749 3750 3751 3752 3753 3756 3773 3788
[417] 3801 3802 3805 3822 3823

There are 421 isolates in the network. 421 genes are not connected to any other gene.

Identifying the name of the Genes that are isoltes

#subset vertex.names attribute to get names of isolates
x <- as.vector(network.stat%v%'vertex.names')[c(isolates(network.stat))]

x
  [1] "ACADSB"   "HSD3B2"   "AUH"      "CUL7"     "TPMT"    
  [6] "HLA-B"    "CAT"      "MDM2"     "COL2A1"   "EGFR"    
 [11] "ADA"      "ADSL"     "MEN1"     "POR"      "TBS19"   
 [16] "GCNT2"    "FGA"      "TYR"      "ALDH2"    "GABRA2"  
 [21] "ALDOA"    "CYP11B2"  "ACTN3"    "ACAT1"    "AMACR"   
 [26] "ENAM"     "AMPD3"    "APOA1"    "GSN"      "LYZ"     
 [31] "ALB"      "MC1R"     "NRAMP2"   "SPTB"     "COL3A1"  
 [36] "XPNPEP2"  "HP"       "AT3"      "FGF10"    "APOA2"   
 [41] "APOC3"    "APOH"     "VPS33B"   "ARG1"     "ASL"     
 [46] "DDC"      "AGA"      "ALOX5"    "TF"       "GATA4"   
 [51] "GLO1"     "DRD4"     "BBS1"     "BBS7"     "BBS2"    
 [56] "BBS4"     "BBS5"     "RFX5"     "RFXAP"    "BSND"    
 [61] "FTL"      "SLC19A3"  "MYF6"     "GP1BA"    "GP1BB"   
 [66] "GP9"      "HLA-DPB1" "BTD"      "HRAS"     "TBXA2R"  
 [71] "ABO"      "DAF"      "AQP3"     "KEL"      "LW"      
 [76] "BSG"      "RHCE"     "XG"       "PHB"      "PLOD2"   
 [81] "MAOA"     "MYC"      "C1QA"     "C1QB"     "C1QG"    
 [86] "C1S"      "C2"       "C3"       "C6"       "C7"      
 [91] "C8B"      "C9"       "ASPA"     "FGFR4"    "CPS1"    
 [96] "SCO2"     "TNNC1"    "COX15"    "MYH8"     "CRYBB1"  
[101] "CD8A"     "CP"       "CLN2"     "CLN5"     "CLN6"    
[106] "CETP"     "DNM2"     "KIAA1985" "CHD7"     "NSDHL"   
[111] "CHIT"     "LIPA"     "EXT1"     "CYBA"     "NCF1"    
[116] "NCF2"     "ASS"      "COH1"     "ODC1"     "BUB1"    
[121] "NDUFS6"   "ALG6"     "ALG12"    "ALG8"     "PLG"     
[126] "CPO"      "IGBP1"    "CPT1A"    "CPT2"     "HLA-DQB1"
[131] "INSL3"    "ELN"      "CTH"      "CTNS"     "D2HGD"   
[136] "HSD17B4"  "DFNA5"    "MYO1A"    "ESPN"     "KIAA1199"
[141] "DRPLA"    "WT1"      "AQP2"     "INSR"     "GCK"     
[146] "PTF1A"    "AKT2"     "IPF1"     "VEGF"     "LIG1"    
[151] "TOP1"     "DBH"      "FAAH"     "F2"       "COL7A1"  
[156] "EDARADD"  "PKP1"     "COL1A2"   "SPTA1"    "COX10"   
[161] "TLR4"     "ENO3"     "EPX"      "ITGA6"    "ME2"     
[166] "SYN1"     "OPCML"    "HBA1"     "HBB"      "HBA2"    
[171] "EPOR"     "LOR"      "RNF6"     "EXT2"     "NPC1L1"  
[176] "GLA"      "MCFD2"    "F7"       "F10"      "F11"     
[181] "F13B"     "FANCF"    "LCAT"     "FMO3"     "KNG"     
[186] "FSHB"     "TDGF1"    "FBP1"     "ALDOB"    "KHK"     
[191] "FUCA1"    "FUT6"     "GALK1"    "GALE"     "GALT"    
[196] "GAMT"     "GBA"      "CYP7B1"   "DMBT1"    "MC2R"    
[201] "GCS1"     "FTCD"     "GCDH"     "GK"       "GNMT"    
[206] "PHKG2"    "G6PT1"    "GAA"      "GBE1"     "GYS2"    
[211] "PYGL"     "PFKM"     "GLB1"     "GM2A"     "KIAA1279"
[216] "DHH"      "CTLA4"    "MLPH"     "GHRHR"    "STAT5B"  
[221] "IGF1"     "OAT"      "ELA2"     "HMOX1"    "AK1"     
[226] "BPGM"     "GPI"      "HK1"      "TPI1"     "F5"      
[231] "LIPC"     "MET"      "HMGCL"    "HMGCS2"   "TBX5"    
[236] "CBS"      "MTHFR"    "HBG1"     "HBG2"     "EPHX2"   
[241] "GLRB"     "GLUD1"    "APOC2"    "AASS"     "INS"     
[246] "KCNMB1"   "ADD1"     "TSHR"     "PAX9"     "LHB"     
[251] "PTH"      "GCMB"     "PAX8"     "TSHB"     "ICHYN"   
[256] "IGHG2"    "CD3E"     "CD3G"     "MYH2"     "ITPA"    
[261] "GABRB3"   "IVD"      "AHI1"     "NAGA"     "IGKC"    
[266] "DSG1"     "GALC"     "LDHB"     "PDX1"     "GHR"     
[271] "ALAD"     "SURF1"    "COL4A6"   "TAL2"     "ARNT"    
[276] "AF1Q"     "NUMA1"    "BCL2"     "TCRA"     "ABL1"    
[281] "LIG4"     "STAR"     "ECM1"     "AKAP10"   "LPA"     
[286] "CILP"     "RAP1GDS1" "BCL8"     "VMD2"     "MASP2"   
[291] "PYGM"     "XK"       "NF2"      "OPHN1"    "ARSA"    
[296] "COL10A1"  "CYB5"     "DIA1"     "MMAA"     "MMAB"    
[301] "RFXANK"   "MCPH1"    "SIX6"     "EDNRA"    "TK2"     
[306] "SUCLA2"   "MYMY3"    "GNPTAG"   "HYAL1"    "PHKA1"   
[311] "IL12RB1"  "MDS1"     "CBFB"     "AMPD1"    "ECGF1"   
[316] "ITGA7"    "CLCN1"    "NAGS"     "NHS"      "HSN2"    
[321] "RAC2"     "GNAT1"    "NP"       "POMC"     "MC4R"    
[326] "UCP3"     "MC3R"     "OA1"      "SAG"      "PAX2"    
[331] "OTC"      "RIL"      "NDUFV2"   "PIGA"     "PEX12"   
[336] "PTS"      "PHGDH"    "PRPS1"    "PHKB"     "PSP"     
[341] "GLI2"     "LHX3"     "PKD1"     "PKDTS"    "COL4A1"  
[346] "UROS"     "UROD"     "PEPD"     "MSR1"     "PROS1"   
[351] "SRD5A2"   "PSORS6"   "CTSK"     "NOS1"     "PC"      
[356] "PDHB"     "OGG1"     "CA2"      "OPRM1"    "LRAT"    
[361] "IMPDH1"   "RP2"      "CERKL"    "RP9"      "USH2A"   
[366] "MERTK"    "RBP4"     "RHD"      "CYP2R1"   "VDR"     
[371] "ESCO2"    "WNT4"     "HEXB"     "NAGLU"    "EMX2"    
[376] "TRAR4"    "SOST"     "SPR"      "USP26"    "IL7R"    
[381] "LHX4"     "NODAL"    "TBX4"     "SPG3A"    "EPB42"   
[386] "PPP2R2B"  "SCA25"    "PLEKHG4"  "SCA8"     "TDP1"    
[391] "MESP2"    "HMGCR"    "SSADH"    "SI"       "SUOX"    
[396] "SOD3"     "FBLN1"    "WHN"      "DAD1"     "HBD"     
[401] "LCRB"     "HRG"      "PROC"     "TRHR"     "TBG"     
[406] "TALDO1"   "TRPS1"    "HADHB"    "SPG20"    "FAH"     
[411] "TAT"      "HPD"      "TBX3"     "APRT"     "GGCX"    
[416] "TKT"      "XDH"      "XPA"      "DDB2"     "PEX16"   
[421] "PEX3"    

Plotting the Gene to Gene network

plot(network.stat)
options(warn=0)
# Calculate the Component Size Distribution of the Graph

n1 = data.frame(Gene = (network.stat%v%'vertex.names'), membership = sna::component.dist(network.stat, connected=c("strong"))$membership, cdist = sna::component.dist(network.stat, connected=c("strong"))$cdist)

n2 = data.frame(csize = sna::component.dist(network.stat,connected=c("strong"))$csize)
# n3 = data.frame(cdist = sna::component.dist(network.stat, connected=c("strong"))$cdist)
# getting network density

network.density(network.stat)
[1] 0.0009092834
# network density without loops

gden(network.stat, diag = FALSE)
[1] 0.0009092834
# Average network degree

sort(sna::degree(network.stat), decreasing = T)
   [1] 82 82 82 70 70 70 60 58 58 58 56 54 48 48 48 46 46 46 46 46 46
  [22] 46 46 46 46 46 46 46 46 46 46 46 44 44 44 44 42 42 42 42 42 40
  [43] 40 40 40 38 38 38 38 38 38 38 38 36 36 36 36 36 36 36 36 36 36
  [64] 36 36 36 36 36 36 36 36 36 36 36 36 36 36 36 36 36 36 36 36 36
  [85] 36 36 36 36 36 34 34 34 34 34 34 34 34 34 34 34 34 34 34 34 34
 [106] 34 34 34 34 34 34 34 34 32 32 32 32 32 32 32 32 32 32 32 32 32
 [127] 32 32 32 32 32 32 32 32 32 32 32 32 32 32 32 30 30 30 30 28 28
 [148] 28 28 28 28 28 28 28 28 28 28 28 28 28 28 28 28 28 28 28 28 28
 [169] 28 28 28 28 28 28 28 28 28 26 26 26 26 26 26 26 26 26 26 26 26
 [190] 26 26 26 26 26 26 26 26 26 26 26 26 26 26 26 24 24 24 24 24 24
 [211] 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24
 [232] 24 24 24 24 24 24 22 22 22 22 22 22 22 22 22 22 22 22 22 22 22
 [253] 22 22 20 20 20 20 20 20 20 20 20 20 20 20 20 20 20 20 20 20 20
 [274] 20 20 20 20 20 20 20 20 20 20 20 20 20 20 20 20 20 20 20 20 20
 [295] 20 20 20 20 20 20 20 20 20 20 20 20 20 18 18 18 18 18 18 18 18
 [316] 18 18 18 18 18 18 18 18 18 18 18 18 18 18 18 18 18 18 18 18 18
 [337] 18 18 18 18 18 18 18 18 18 18 18 18 18 18 18 18 18 18 18 18 18
 [358] 18 18 18 18 18 18 18 18 18 18 16 16 16 16 16 16 16 16 16 16 16
 [379] 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16
 [400] 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16
 [421] 16 16 16 16 16 16 16 16 16 16 16 16 16 14 14 14 14 14 14 14 14
 [442] 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14
 [463] 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14
 [484] 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14
 [505] 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14
 [526] 14 14 14 14 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12
 [547] 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12
 [568] 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12
 [589] 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12
 [610] 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12
 [631] 12 12 12 12 12 12 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10
 [652] 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10
 [673] 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10
 [694] 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10
 [715] 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10  8  8
 [736]  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8
 [757]  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8
 [778]  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8
 [799]  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8
 [820]  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8
 [841]  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8
 [862]  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8
 [883]  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8
 [904]  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8
 [925]  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8
 [946]  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8
 [967]  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8
 [988]  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8
[1009]  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8
[1030]  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8  8
[1051]  8  8  8  8  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1072]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1093]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1114]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1135]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1156]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1177]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1198]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1219]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1240]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1261]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1282]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1303]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1324]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1345]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1366]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1387]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1408]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1429]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1450]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1471]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1492]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1513]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1534]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1555]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1576]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1597]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1618]  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6  6
[1639]  6  6  6  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[1660]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[1681]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[1702]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[1723]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[1744]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[1765]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[1786]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[1807]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[1828]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[1849]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[1870]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[1891]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[1912]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[1933]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[1954]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[1975]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[1996]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[2017]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[2038]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[2059]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[2080]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[2101]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[2122]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[2143]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[2164]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[2185]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[2206]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[2227]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[2248]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[2269]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[2290]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[2311]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[2332]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[2353]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[2374]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[2395]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[2416]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[2437]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[2458]  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4  4
[2479]  4  4  4  4  4  4  4  4  4  4  4  4  2  2  2  2  2  2  2  2  2
[2500]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[2521]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[2542]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[2563]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[2584]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[2605]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[2626]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[2647]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[2668]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[2689]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[2710]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[2731]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[2752]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[2773]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[2794]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[2815]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[2836]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[2857]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[2878]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[2899]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[2920]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[2941]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[2962]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[2983]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[3004]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[3025]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[3046]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[3067]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[3088]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[3109]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[3130]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[3151]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[3172]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[3193]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[3214]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[3235]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[3256]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[3277]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[3298]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[3319]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[3340]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[3361]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[3382]  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2  2
[3403]  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0
[3424]  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0
[3445]  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0
[3466]  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0
[3487]  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0
[3508]  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0
[3529]  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0
[3550]  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0
[3571]  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0
[3592]  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0
[3613]  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0
[3634]  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0
[3655]  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0
[3676]  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0
[3697]  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0
[3718]  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0
[3739]  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0
[3760]  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0
[3781]  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0
[3802]  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0
[3823]  0
#creating dataframe of vertex names and degree

data.frame(name = network.stat %v% "vertex.names", degree = sort(sna::degree(network.stat), decreasing = T))
          name degree
1      CYP17A1     82
2        CYP17     82
3      P450C17     82
4        HADH2     70
5         ERAB     70
6       ACADSB     70
7       HSD3B2     60
8       HADHSC     58
9        SCHAD     58
10       MCCC1     58
11        MCCA     56
12       MCCC2     54
13        MCCB     48
14         AUH     48
15        OPA3     48
16        MGA3     46
17        CUL7     46
18        TPMT     46
19        FGD1     46
20        FGDY     46
21         AAS     46
22       HLA-B     46
23       EDNRB     46
24       HSCR2     46
25       ABCDS     46
26         MTP     46
27        APOB     46
28        FLDB     46
29        SOX9     46
30        CMD1     46
31        SRA1     46
32         CAT     46
33        MDM2     44
34        AAAS     44
35         AAA     44
36      C7orf2     44
37        ACHP     42
38       LMBR1     42
39      COL2A1     42
40     SLC26A2     42
41         DTD     42
42       DTDST     40
43     D5S1708     40
44        EDM4     40
45       FGFR3     40
46         ACH     38
47       CNGA3     38
48        CNG3     38
49       ACHM2     38
50       CNGB3     38
51       ACHM3     38
52       GNAT2     38
53       ACHM4     38
54      IGFALS     36
55         ALS     36
56       KCNH2     36
57        LQT2     36
58        HERG     36
59        GLI3     36
60        PAPA     36
61        PAPB     36
62        ACLS     36
63         IHH     36
64        BDA1     36
65     SLC39A4     36
66        ZIP4     36
67      ATP2A2     36
68       ATP2B     36
69         DAR     36
70        GNAS     36
71       GNAS1     36
72        GPSA     36
73         POH     36
74       PHP1B     36
75       PHP1A     36
76         AHO     36
77       SSTR5     36
78        GDF5     36
79       CDMP1     36
80        NPR2     36
81       ANPRB     36
82        AMDM     36
83       ACADL     36
84        LCAD     36
85       ACADM     36
86        MCAD     36
87       ACADS     36
88        SCAD     36
89        EGFR     36
90        BRAF     34
91       ERBB2     34
92         NGL     34
93         NEU     34
94        HER2     34
95        PRKN     34
96       PARK2     34
97         PDJ     34
98         APC     34
99          GS     34
100        FPC     34
101      MUTYH     34
102      PLAG1     34
103       SGPA     34
104        PSA     34
105        ADA     34
106       ADSL     34
107       APM1     34
108      GBP28     34
109       MEN1     34
110       TP53     34
111        P53     34
112       LFS1     34
113    CYP11B1     34
114    P450C11     32
115        FHI     32
116    CYP21A2     32
117      CYP21     32
118      CA21H     32
119        POR     32
120       DAX1     32
121        AHC     32
122        AHX     32
123      NROB1     32
124      FTZF1     32
125       FTZ1     32
126        SF1     32
127    PRKAR1A     32
128       TSE1     32
129       CNC1     32
130        CAR     32
131      TBS19     32
132      ABCD1     32
133        ALD     32
134        AMN     32
135      PEX10     32
136       NALD     32
137      PEX13     32
138        ZWS     32
139       PEX1     32
140       ZWS1     32
141      PEX26     32
142       PXR1     30
143       PEX5     30
144      PTS1R     30
145      GCNT2     30
146      TP73L     28
147       TP63     28
148        KET     28
149       EEC3     28
150      SHFM4     28
151        LMS     28
152        RHS     28
153       PER2     28
154      FASPS     28
155   KIAA0347     28
156        FGA     28
157        FGB     28
158       IGHM     28
159         MU     28
160      IGLL1     28
161        IGO     28
162       IGL5     28
163     VPREB2     28
164      LRRC8     28
165   KIAA1437     28
166        BTK     28
167      AGMX1     28
168       IMD1     28
169        XLA     28
170         AT     28
171       GATM     28
172       AGAT     28
173    SLC12A6     28
174      KCC3A     28
175      KCC3B     28
176       KCC3     28
177      ACCPN     28
178       ATIC     26
179       PURH     26
180      AICAR     26
181    KIR3DL1     26
182      NKAT3     26
183       NKB1     26
184      AMB11     26
185    KIR3DS1     26
186       IFNG     26
187     CXCL12     26
188       SDF1     26
189       JAG1     26
190        AGS     26
191        AHD     26
192       OCA2     26
193          P     26
194        PED     26
195     D15S12     26
196       BOCA     26
197        TYR     26
198      TYRP1     26
199       CAS2     26
200       GP75     26
201      HTR2A     26
202      ALDH2     26
203     GABRA2     26
204      ALDOA     26
205    CYP11B2     24
206       GFAP     24
207     NDUFV1     24
208      UQOR1     24
209        HGD     24
210        AKU     24
211    SLC16A2     24
212     DXS128     24
213       XPCT     24
214       IL13     24
215       ALRH     24
216         HR     24
217         AU     24
218       POLG     24
219      POLG1     24
220      POLGA     24
221        PEO     24
222   SERPINA3     24
223       AACT     24
224        ACT     24
225      ACTN3     24
226      ACAT1     24
227      AMACR     24
228       ATRX     24
229        XH2     24
230        XNP     24
231      MRXS3     24
232        SHS     24
233     COL4A5     24
234        ATS     24
235       ASLN     24
236     COL4A3     24
237     COL4A4     24
238      ALMS1     22
239       ALSS     22
240   KIAA0328     22
241     ATP1A2     22
242       FHM2     22
243       MHP2     22
244     ASPCR1     22
245      RCC17     22
246       ASPL     22
247       ASPS     22
248        APP     22
249       CVAP     22
250        AD1     22
251       APOE     22
252        AD2     22
253      PSEN2     22
254        AD4     22
255       STM2     20
256      APBB2     20
257     FE65L1     20
258       NOS3     20
259       PLAU     20
260        URK     20
261        ACE     20
262       DCP1     20
263       ACE1     20
264        MPO     20
265     PACIP1     20
266    PAXIP1L     20
267       PTIP     20
268        A2M     20
269       BLMH     20
270        BMH     20
271      PSEN1     20
272        AD3     20
273       ENAM     20
274      AMELX     20
275        AMG     20
276       AIH1     20
277       AMGX     20
278       DLX3     20
279        TDO     20
280       KLK4     20
281      EMSP1     20
282     PRSS17     20
283      SIAT9     20
284    ST3GALV     20
285      AMPD3     20
286        TTR     20
287       PALB     20
288      APOA1     20
289        GSN     20
290        LYZ     20
291       VAPB     20
292       VAPC     20
293       ALS8     20
294       SOD1     20
295       ALS1     20
296       ALS2     20
297       ALSJ     20
298       PLSJ     20
299      IAHSP     20
300      DCTN1     20
301       NEFH     20
302       PRPH     20
303        ALB     20
304       MC1R     20
305      SARA2     20
306      SAR1B     20
307       CMRD     20
308         AR     18
309       DHTR     18
310        TFM     18
311       SBMA     18
312         KD     18
313      SMAX1     18
314      CDAN1     18
315       CDA1     18
316      RPS19     18
317        DBA     18
318       PKLR     18
319        PK1     18
320      NT5C3     18
321      UMPH1     18
322       PSN1     18
323       RHAG     18
324      RH50A     18
325     NRAMP2     18
326       SPTB     18
327      ALAS2     18
328       ANH1     18
329        ASB     18
330      ABCB7     18
331       ABC7     18
332       ASAT     18
333     COL3A1     18
334      MECP2     18
335        RTT     18
336       PPMX     18
337      MRX16     18
338      MRX79     18
339      UBE3A     18
340       ANCR     18
341       C1NH     18
342       HAE1     18
343       HAE2     18
344   SERPING1     18
345    XPNPEP2     18
346         HP     18
347       PAX6     18
348        AN2     18
349       MGDA     18
350       SOX2     18
351      ANOP3     18
352       EYA1     18
353        BOR     18
354      FOXE3     18
355     FKHL12     18
356       ASMD     18
357      FOXC1     18
358      FKHL7     18
359     FREAC3     18
360      PITX3     18
361        AT3     18
362     SLC6A4     18
363        HTT     18
364       OCD1     18
365       FBN1     18
366       MFS1     18
367        WMS     18
368      FGFR2     16
369        BEK     16
370       CFD1     16
371        JWS     16
372      FGF10     16
373       TERC     16
374       TRC3     16
375         TR     16
376       TERT     16
377       TCS1     16
378       EST2     16
379       BCHE     16
380       CHE1     16
381      APOA2     16
382      APOC3     16
383       APOH     16
384    HSD11B2     16
385     HSD11K     16
386       AQP1     16
387     CHIP28     16
388         CO     16
389     VPS33B     16
390       ARG1     16
391        ASL     16
392    CYP19A1     16
393      CYP19     16
394        ARO     16
395        DDC     16
396       RYR2     16
397      VTSIP     16
398        DSP     16
399      KPPS2     16
400      PPKS2     16
401       PKP2     16
402      ARVD9     16
403       TPM2     16
404       TMSB     16
405      AMCD1     16
406        DA1     16
407      TNNI2     16
408     AMCD2B     16
409       DA2B     16
410       FSSV     16
411      WISP3     16
412       PPAC     16
413        PPD     16
414      TNNT3     16
415        AGA     16
416      NLGN3     16
417      NLGN4     16
418   KIAA1260     16
419     AUTSX2     16
420      PHF11     16
421    NYREN34     16
422      MS4A2     16
423     FCER1B     16
424      ALOX5     16
425      ADRB2     16
426      PTGDR     16
427        AS1     16
428     GPR154     16
429       GPRA     16
430       VRR1     16
431      PGR14     16
432       HNMT     16
433      IL12B     16
434      NKSF2     14
435     PLA2G7     14
436      PAFAH     14
437    SCGB3A2     14
438      UGRP1     14
439        TNF     14
440       TNFA     14
441        UGB     14
442       CC10     14
443       CCSP     14
444    SCGB1A1     14
445      ATCAY     14
446       CLAC     14
447   KIAA1872     14
448       APTX     14
449        AOA     14
450       AOA1     14
451     CACNB4     14
452        EJM     14
453       SETX     14
454      SCAR1     14
455       AOA2     14
456        ATM     14
457        ATA     14
458        AT1     14
459     MRE11A     14
460      MRE11     14
461       ATLD     14
462       TTPA     14
463       TTP1     14
464       AVED     14
465       FLNB     14
466        SCT     14
467        AOI     14
468      HOXA1     14
469      HOX1F     14
470       BSAS     14
471     SPINK5     14
472      LEKTI     14
473     HAVCR1     14
474      HAVCR     14
475       SELP     14
476       GRMP     14
477       IL4R     14
478      IL4RA     14
479         TF     14
480      KCNE2     14
481      MIRP1     14
482       LQT6     14
483      KCNQ1     14
484      KCNA9     14
485       LQT1     14
486     KVLQT1     14
487      ATFB1     14
488      GATA4     14
489       MYH6     14
490       ASD3     14
491      MYHCA     14
492      NKX2E     14
493        CSX     14
494       GJA1     14
495       CX43     14
496       ODDD     14
497      SDTY3     14
498       ODOD     14
499     CRELD1     14
500      AVSD2     14
501       DRD5     14
502      DRD1B     14
503     DRD1L2     14
504       GLO1     14
505    TNFRSF6     14
506       APT1     14
507        FAS     14
508       CD95     14
509     ALPS1A     14
510     CASP10     14
511       MCH4     14
512      ALPS2     14
513      CASP8     14
514       MCH5     14
515       AIRE     14
516     APECED     14
517         TG     14
518      AITD3     14
519       DRD4     14
520      USP9Y     14
521      DFFRY     14
522      SYCP3     14
523       SCP3     14
524       COR1     14
525      FOXE1     14
526     FKHL15     14
527      TITF2     14
528       TTF2     14
529       PTEN     14
530      MMAC1     12
531       BBS1     12
532       ARL6     12
533       BBS3     12
534       BBS7     12
535       BBS2     12
536       BBS4     12
537       BBS5     12
538       MKKS     12
539       HMCS     12
540        KMS     12
541        MKS     12
542       BBS6     12
543       TTC8     12
544       BBS8     12
545      TAPBP     12
546       TPSN     12
547       TAP2     12
548      ABCB3     12
549       PSF2     12
550     RING11     12
551     MHC2TA     12
552       C2TA     12
553       RFX5     12
554      RFXAP     12
555        TAZ     12
556       EFE2     12
557       BTHS     12
558      CMD3A     12
559      LVNCX     12
560       GJB2     12
561       CX26     12
562      DFNB1     12
563        PPK     12
564      DFNA3     12
565        KID     12
566        HID     12
567    SLC12A1     12
568      NKCC2     12
569      KCNJ1     12
570      ROMK1     12
571     CLCNKB     12
572       BSND     12
573     CLCNKA     12
574      RASA1     12
575        GAP     12
576      CMAVM     12
577       PKWS     12
578      PTCH2     12
579       PTCH     12
580      NBCCS     12
581       BCNS     12
582       HPE7     12
583       SMOH     12
584        SMO     12
585        FTL     12
586    SLC19A3     12
587      BCL7A     12
588       BCL7     12
589     IFNGR1     12
590        DMD     12
591        BMD     12
592       MYF6     12
593     CDKN1C     12
594       KIP2     12
595        BWS     12
596        H19     12
597   D11S813E     12
598       ASM1     12
599   KCNQ10T1     12
600       LIT1     12
601       NSD1     12
602     ARA267     12
603        STO     12
604       NQO1     12
605       DIA4     12
606      NMOR1     12
607      GP1BA     12
608      GP1BB     12
609        GP9     12
610   HLA-DPB1     12
611       UPB1     12
612       BUP1     12
613     COL6A1     12
614       OPLL     12
615     COL6A2     12
616     COL6A3     12
617     CYP4V2     12
618        BCD     12
619    SLC10A2     12
620      NTCP2     12
621        BTD     12
622       XBP1     12
623       XBP2     12
624       FLCN     12
625        BHD     12
626      KRAS2     12
627      RASK2     12
628        RB1     12
629       HRAS     12
630     CARD15     12
631       NOD2     12
632       IBD1     12
633         CD     12
634       ACUG     12
635    PSORAS1     12
636     TBXA2R     12
637      P2RX1     10
638       P2X1     10
639      FOXL2     10
640       BPES     10
641      BPES1     10
642       PFRK     10
643       POF3     10
644        ABO     10
645         LU     10
646       BCAM     10
647        DAF     10
648     SLC4A1     10
649        AE1     10
650       EPB3     10
651       ART4     10
652         DO     10
653       GYPC     10
654         GE     10
655        GPC     10
656       AQP3     10
657       CD44     10
658       MDU2     10
659       MDU3     10
660       MIC4     10
661        KEL     10
662    SLC14A1     10
663         JK     10
664        UTE     10
665        UT1     10
666        CR1     10
667       C3BR     10
668         LW     10
669       FUT3     10
670         LE     10
671       GYPA     10
672         MN     10
673        GPA     10
674        BSG     10
675     A4GALT     10
676         PK     10
677    B3GALT3     10
678      GLCT3     10
679       RHCE     10
680       GYPB     10
681         SS     10
682        MNS     10
683         XG     10
684       ACHE     10
685         YT     10
686     RECQL3     10
687      RECQ2     10
688        BLM     10
689         BS     10
690     OPN1LW     10
691        RCP     10
692        CBP     10
693       CBBM     10
694     OPN1MW     10
695        GCP     10
696        CBD     10
697       FUT1     10
698          H     10
699         HH     10
700       FUT2     10
701         SE     10
702       LRP5     10
703      BMND1     10
704       LRP7     10
705        LR3     10
706       OPPG     10
707      VBCH2     10
708       PHF6     10
709       BFLS     10
710      RLBP1     10
711     BMPR1B     10
712       ALK6     10
713       ROR2     10
714       BDB1     10
715        BDB     10
716     NTRKR2     10
717     HOXD13     10
718      HOX4I     10
719        SPD     10
720       R9AP     10
721       RGS9     10
722      PERRS     10
723      CHEK2     10
724      RAD53     10
725       CHK2     10
726       CDS1     10
727       LFS2     10
728     PIK3CA     10
729      PPM1D     10
730       WIP1     10
731   SLC22A1L     10
732    BWSCR1A     10
733      IMPT1     10
734      BRCA1      8
735       PSCP      8
736      BRCA2      8
737     FANCD1      8
738     TSG101      8
739      BRIP1      8
740      BACH1      8
741      FANCJ      8
742     RAD54L      8
743       HR54      8
744     HRAD54      8
745       CDH1      8
746        UVO      8
747     RB1CC1      8
748        CC1      8
749   KIAA0203      8
750        PHB      8
751      BARD1      8
752     RAD51A      8
753       RECA      8
754      XRCC3      8
755     ATP2A1      8
756     SERCA1      8
757      PLOD2      8
758      SCN5A      8
759       LQT3      8
760        IVF      8
761        HB1      8
762       SSS1      8
763       MAOA      8
764        MYC      8
765      LEMD3      8
766       MAN1      8
767        RDS      8
768        RP7      8
769      PRPH2      8
770       AVMD      8
771      AOFMD      8
772       C1QA      8
773       C1QB      8
774       C1QG      8
775        C1S      8
776         C2      8
777         IF      8
778         C3      8
779        C4A      8
780        C4S      8
781        C4B      8
782        C4F      8
783         C6      8
784         C7      8
785        C8B      8
786         C9      8
787       MSH2      8
788      COCA1      8
789       FCC1      8
790     HNPCC1      8
791       MLH1      8
792      COCA2      8
793     HNPCC2      8
794     COL1A1      8
795      FGF23      8
796       ADHR      8
797      HPDR2      8
798      PHPTC      8
799     GALNT3      8
800       PRG4      8
801       CACP      8
802        MSF      8
803        SZP      8
804       HAPO      8
805      TGFB1      8
806       DPD1      8
807        CED      8
808       ASPA      8
809      FGFR4      8
810       MSH6      8
811       GTBP      8
812     HNPCC5      8
813       CPS1      8
814       PMM2      8
815       CDG1      8
816        MPI      8
817       PMI1      8
818      MGAT2      8
819      CDGS2      8
820       CPN1      8
821       SCPN      8
822        CPN      8
823       SDHD      8
824       PGL1      8
825       SCO2      8
826       MYL3      8
827       CMH8      8
828       ACTC      8
829       MYH7      8
830       CMH1      8
831       MPD1      8
832       LMNA      8
833       LMN1      8
834       EMD2      8
835       FPLD      8
836      CMD1A      8
837       HGPS      8
838     LGMD1B      8
839      TNNT2      8
840       CMH2      8
841      CMD1D      8
842        TTN      8
843      CMD1G      8
844        DES      8
845      CMD1I      8
846       EYA4      8
847     DFNA10      8
848      CMD1J      8
849       SGCD      8
850        SGD      8
851     LGMD2F      8
852      CMD1L      8
853      CSRP3      8
854       CRP3      8
855        CLP      8
856      CMD1M      8
857       TCAP      8
858     LGMD2G      8
859      CMD1N      8
860      ABCC9      8
861       SUR2      8
862       MYL2      8
863      CMH10      8
864       CAV3      8
865     LGMD1C      8
866      TNNC1      8
867       TPM1      8
868       CMH3      8
869      TNNI3      8
870     MYBPC3      8
871       CMH4      8
872        TMD      8
873     LGMD2J      8
874      COX15      8
875      MYLK2      8
876       MLCK      8
877     PRKAG2      8
878       WPWS      8
879        PLN      8
880        PLB      8
881       MYH8      8
882   SLC25A20      8
883       CACT      8
884        CAC      8
885    SLC22A5      8
886      OCTN2      8
887       CDSP      8
888        SCD      8
889       RMRP      8
890      RMRPR      8
891        CHH      8
892      CRYAA      8
893      CRYA1      8
894     CRYBB2      8
895      CRYB2      8
896      BFSP2      8
897       CP49      8
898       CP47      8
899     CRYBA1      8
900      CRYB1      8
901      CRYGC      8
902      CRYG3      8
903        CCL      8
904       LIM2      8
905       MP19      8
906      CRYGD      8
907      CRYG4      8
908       HSF4      8
909        CTM      8
910        MIP      8
911       AQP0      8
912      CRYAB      8
913      CRYA2      8
914      CTPP2      8
915     CRYBB1      8
916       GJA8      8
917       CX50      8
918       CAE1      8
919       GJA3      8
920       CX46      8
921       CZP3      8
922       CAE3      8
923       CCM1      8
924        CAM      8
925      KRIT1      8
926       CD59      8
927      MIC11      8
928       CD8A      8
929       RYR1      8
930        MHS      8
931        CCO      8
932       GDNF      8
933       BDNF      8
934       EDN3      8
935      PMX2B      8
936     NBPHOX      8
937     PHOX2B      8
938        RET      8
939      MEN2A      8
940         CP      8
941    CACNA1A      8
942   CACNL1A4      8
943       SCA6      8
944      VLDLR      8
945    VLDLRCH      8
946      ABCA1      8
947       ABC1      8
948     HDLDT1      8
949        TGD      8
950       CST3      8
951     NOTCH3      8
952    CADASIL      8
953      CASIL      8
954    C7orf22      8
955       CCM2      8
956    MGC4067      8
957     PDCD10      8
958     TFAR15      8
959       CCM3      8
960     SNAP29      8
961     CEDNIK      8
962      ERCC2      8
963        EM9      8
964      ERCC5      8
965        XPG      8
966      ERCC6      8
967       CKN2      8
968       COFS      8
969        CSB      8
970    CYP27A1      8
971      CYP27      8
972        CTX      8
973       PPT1      8
974       CLN1      8
975       CLN2      8
976       CLN3      8
977        BTS      8
978       CLN5      8
979       CLN6      8
980       CLN8      8
981       EPMR      8
982       CETP      8
983      ABHD5      8
984      CGI58      8
985      IECN2      8
986      NCIE2      8
987      HSPB1      8
988      HSP27      8
989      CMT2F      8
990        MPZ      8
991      CMT1B      8
992     CMTDI3      8
993        CHM      8
994        DSS      8
995       DNM2      8
996     HOXD10      8
997      HOX4D      8
998      GDAP1      8
999      CMT4A      8
1000     CMT2K      8
1001     CMT2G      8
1002     PMP22      8
1003     CMT1A      8
1004     CMT1E      8
1005     LITAF      8
1006     CMT1C      8
1007      EGR2      8
1008    KROX20      8
1009      NEFL      8
1010     CMT2E      8
1011     CMT1F      8
1012     KIF1B      8
1013     CMT2A      8
1014    CMT2A1      8
1015      MFN2      8
1016  KIAA0214      8
1017    CMT2A2      8
1018      RAB7      8
1019     CMT2B      8
1020       PSN      8
1021      GARS      8
1022     SMAD1      8
1023     CMT2D      8
1024     MTMR2      8
1025    CMT4B1      8
1026      SBF2      8
1027    MTMR13      8
1028    CMT4B2      8
1029  KIAA1985      8
1030     NDRG1      8
1031     HMSNL      8
1032     CMT4D      8
1033      GJB1      8
1034      CX32      8
1035     CMTX1      8
1036      CHD7      8
1037    TFAP2B      8
1038      CHAR      8
1039      CHS1      8
1040      LYST      8
1041    SH3BP2      8
1042      CRPM      8
1043     NSDHL      8
1044      CHIT      8
1045   SLC26A3      8
1046       DRA      8
1047       CLD      8
1048     ABCB4      8
1049      PGY3      8
1050      MDR3      8
1051    ATP8B1      8
1052      FIC1      8
1053      BRIC      8
1054     PFIC1      8
1055    ABCB11      6
1056      BSEP      6
1057      SPGP      6
1058     PFIC2      6
1059    HSD3B7      6
1060     PFIC4      6
1061      LIPA      6
1062      ANKH      6
1063      HANK      6
1064       ANK      6
1065      CMDJ      6
1066     CCAL2      6
1067     CPPDD      6
1068     GNPAT      6
1069    DHAPAT      6
1070       EBP      6
1071     CDPX2      6
1072      CPXD      6
1073       CPX      6
1074      ARSE      6
1075     CDPX1      6
1076     CDPXR      6
1077      EXT1      6
1078      CSMF      6
1079     EWSR1      6
1080       EWS      6
1081     TITF1      6
1082     NKX2A      6
1083      TTF1      6
1084    VPS13A      6
1085      CHAC      6
1086       TCD      6
1087     PSAP2      6
1088   PROSAP2      6
1089  KIAA1650      6
1090      CYBA      6
1091      NCF1      6
1092      NCF2      6
1093      CYBB      6
1094       CGD      6
1095      MBL2      6
1096       MBL      6
1097      MBP1      6
1098       LPL      6
1099      LIPD      6
1100     DNAI1      6
1101     CILD1      6
1102       ICS      6
1103       PCD      6
1104     DNAH5      6
1105       HL1      6
1106     CILD3      6
1107     CIAS1      6
1108    C1orf7      6
1109       FCU      6
1110      FCAS      6
1111     KRT18      6
1112      KRT8      6
1113    CIRH1A      6
1114      NAIC      6
1115    TEX292      6
1116  KIAA1988      6
1117       ASS      6
1118  SLC25A13      6
1119     CTLN2      6
1120      HVEC      6
1121     PVRL1      6
1122     PVRR1      6
1123      PRR1      6
1124      MSX1      6
1125      HOX7      6
1126      HYD1      6
1127      OFC5      6
1128     TBX22      6
1129     RUNX2      6
1130     CBFA1      6
1131   PEBP2A1      6
1132      AML3      6
1133       NDP      6
1134        ND      6
1135     ERCC8      6
1136      CKN1      6
1137       CSA      6
1138    CYP2D@      6
1139     CYP2D      6
1140   P450C2D      6
1141   RPS6KA3      6
1142      RSK2      6
1143     MRX19      6
1144      COH1      6
1145     ABCB1      6
1146      PGY1      6
1147      MDR1      6
1148     CRLF1      6
1149      CISS      6
1150       SHH      6
1151      HPE3      6
1152      HLP3      6
1153     SMMCI      6
1154    RAD54B      6
1155     BCL10      6
1156    PTPN12      6
1157     PTPG1      6
1158    TGFBR2      6
1159    HNPCC6      6
1160       SRC      6
1161       ASV      6
1162      SRC1      6
1163      MLH3      6
1164    HNPCC7      6
1165     PTPRJ      6
1166      DEP1      6
1167      ODC1      6
1168    OPN1SW      6
1169       BCP      6
1170       CBT      6
1171     AXIN2      6
1172     BUB1B      6
1173     BUBR1      6
1174     EP300      6
1175    PDGFRL      6
1176     PDGRL      6
1177     PRLTS      6
1178       BAX      6
1179    CTNNB1      6
1180       DCC      6
1181       MCC      6
1182      NRAS      6
1183      PMS1      6
1184     PMSL1      6
1185    HNPCC3      6
1186      PMS2      6
1187     PMSL2      6
1188    HNPCC4      6
1189      DLC1      6
1190   PLA2G2A      6
1191     PLA2B      6
1192     PLA2L      6
1193      MOM1      6
1194     CCND1      6
1195     PRAD1      6
1196      BCL1      6
1197      BUB1      6
1198     LMAN1      6
1199   ERGIC53      6
1200     F5F8D      6
1201     MCFD1      6
1202     IL2RG      6
1203    SCIDX1      6
1204     SCIDX      6
1205      IMD4      6
1206      GFM1      6
1207      EFG1      6
1208       GFM      6
1209      PSAP      6
1210      SAP1      6
1211    NDUFS6      6
1212    ATPAF2      6
1213     ATP12      6
1214      RPGR      6
1215       RP3      6
1216       CRD      6
1217      RP15      6
1218      COD1      6
1219    GUCA1A      6
1220      GCAP      6
1221     ABCA4      6
1222      ABCR      6
1223     STGD1      6
1224       FFM      6
1225      RP19      6
1226     AIPL1      6
1227      LCA4      6
1228    GUCY2D      6
1229     GUC2D      6
1230      LCA1      6
1231     CORD6      6
1232   RPGRIP1      6
1233      LCA6      6
1234     CORD9      6
1235       CRX      6
1236     CORD2      6
1237      CFTR      6
1238     ABCC7      6
1239        CF      6
1240      MRP7      6
1241     CTDP1      6
1242      FCP1      6
1243     CCFDN      6
1244      ALG6      6
1245      ALG3      6
1246    NOT56L      6
1247     CDGS4      6
1248      DPM1      6
1249      MPDS      6
1250     CDGIE      6
1251     MPDU1      6
1252      SL15      6
1253     CDGIF      6
1254     ALG12      6
1255      ALG8      6
1256      ALG2      6
1257     CDGII      6
1258     DIBD1      6
1259      ALG9      6
1260   SLC35C1      6
1261     FUCT1      6
1262   B4GALT1      6
1263     GGTB2      6
1264       GT1      6
1265       GTB      6
1266      COG7      6
1267     CDG2E      6
1268    DPAGT2      6
1269      DGPT      6
1270      ALG1      6
1271     HMAT1      6
1272      HMT1      6
1273    ADRA2C      6
1274   ADRA2L2      6
1275     ADRB1      6
1276    ADRB1R      6
1277       RHR      6
1278       PLG      6
1279      TBX1      6
1280       DGS      6
1281      CTHM      6
1282      CAFS      6
1283       TGA      6
1284      DORV      6
1285      VCFS      6
1286      DGCR      6
1287      FBN2      6
1288       CCA      6
1289     MASS1      6
1290     VLGR1      6
1291  KIAA0686      6
1292      FEB4      6
1293     USH2C      6
1294      MMP1      6
1295       CLG      6
1296       CPO      6
1297     TGFBI      6
1298      CSD2      6
1299     CDGG1      6
1300       CSD      6
1301     BIGH3      6
1302      CDG2      6
1303   TACSTD2      6
1304     TROP2      6
1305      M1S1      6
1306      VSX1      6
1307      RINX      6
1308      PPCD      6
1309      KTCN      6
1310    COL8A2      6
1311      FECD      6
1312     PPCD2      6
1313    PIP5K3      6
1314       CFD      6
1315      KERA      6
1316      CNA2      6
1317     NIPBL      6
1318      CDLS      6
1319     MEF2A      6
1320    ADCAD1      6
1321        KL      6
1322      PON1      6
1323       PON      6
1324       ESA      6
1325      PON2      6
1326      MMP3      6
1327     STMY1      6
1328     IGBP1      6
1329     NR3C1      6
1330       GCR      6
1331       GRL      6
1332       GDH      6
1333   HSD11B1      6
1334     HSD11      6
1335    HSD11L      6
1336    CYP2A6      6
1337    CYP2A3      6
1338     CYP2A      6
1339   P450C2A      6
1340    BMPR1A      6
1341   ACVRLK3      6
1342      ALK3      6
1343     CPT1A      6
1344      CPT2      6
1345     SCN4A      6
1346      HYPP      6
1347     NAC1A      6
1348      PAX3      6
1349       WS1      6
1350      HUP2      6
1351      CDHS      6
1352     EFNB1      6
1353     EPLG2      6
1354      CFNS      6
1355      CFND      6
1356      MSX2      6
1357      CRS2      6
1358      HOX8      6
1359     L1CAM      6
1360     CAML1      6
1361     HSAS1      6
1362    SLC6A8      6
1363      CRTR      6
1364      PRNP      6
1365      PRIP      6
1366  HLA-DQB1      6
1367    UGT1A1      6
1368      UGT1      6
1369      GNT1      6
1370      DLG5      6
1371      PDLG      6
1372  KIAA0583      6
1373      LGR8      6
1374     GREAT      6
1375     INSL3      6
1376     HLXB9      6
1377    HOXHB9      6
1378     SCRA1      6
1379       ELN      6
1380     FBLN5      6
1381     ARMD3      6
1382     ATP7A      6
1383       MNK      6
1384        MK      6
1385       OHS      6
1386      KRT1      6
1387     CYLD1      6
1388      CDMT      6
1389       EAC      6
1390       CTH      6
1391      CTNS      6
1392    SLC3A1      6
1393      ATR1      6
1394       D2H      6
1395      NBAT      6
1396    SLC7A9      6
1397     CSNU3      6
1398     D2HGD      6
1399   HSD17B4      6
1400    DIAPH1      6
1401     DFNA1      6
1402     LFHL1      6
1403     MYO7A      6
1404     USH1B      6
1405     DFNB2      6
1406    DFNA11      6
1407     TECTA      6
1408     DFNA8      6
1409    DFNA12      6
1410    DFNB21      6
1411   COL11A2      6
1412      STL3      6
1413    DFNA13      6
1414    POU4F3      6
1415     BRN3C      6
1416      MYH9      6
1417       MHA      6
1418      FTNS      6
1419    DFNA17      6
1420     ACTG1      6
1421    DFNA20      6
1422    DFNA26      6
1423      MYO6      6
1424    DFNA22      6
1425    DFNB37      6
1426      GJB3      6
1427      CX31      6
1428     DFNA2      6
1429     KCNQ4      6
1430   TFCP2L3      6
1431    DFNA28      6
1432      GJB6      6
1433      CX30      6
1434       HED      6
1435       ED2      6
1436      TMC1      6
1437     DFNB7      6
1438    DFNB11      6
1439    DFNA36      6
1440      DSPP      6
1441       DPP      6
1442      DGI1      6
1443    DFNA39      6
1444     DTDP2      6
1445      CRYM      6
1446    DFNA40      6
1447     MYH14      6
1448  KIAA2034      6
1449     DFNA4      6
1450     DFNA5      6
1451      COCH      6
1452     DFNA9      6
1453     MYO1A      6
1454   TMPRSS3      6
1455    ECHOS1      6
1456     DFNB8      6
1457    DFNB10      6
1458     CDH23      6
1459     USH1D      6
1460    ATP2B2      6
1461     PMCA2      6
1462      STRC      6
1463    DFNB16      6
1464     USH1C      6
1465    DFNB18      6
1466      OTOA      6
1467    DFNB22      6
1468    PCDH15      6
1469    DFNB23      6
1470    CLDN14      6
1471    DFNB29      6
1472     MYO3A      6
1473    DFNB30      6
1474      WHRN      6
1475     CIP98      6
1476  KIAA1526      6
1477    DFNB31      6
1478    MYO15A      6
1479     DFNB3      6
1480      ESPN      6
1481   SLC26A4      6
1482       PDS      6
1483     DFNB4      6
1484      PRES      6
1485    DFNB61      6
1486   SLC26A5      6
1487      TMIE      6
1488     DFNB6      6
1489      OTOF      6
1490     DFNB9      6
1491     NSRD9      6
1492  KIAA1199      6
1493    TIMM8A      6
1494      DFN1      6
1495       DDP      6
1496       MTS      6
1497      DDP1      6
1498    POU3F4      6
1499      DFN3      6
1500       PRX      6
1501     CMT4F      6
1502     AANAT      6
1503      SNAT      6
1504     ITM2B      6
1505       BRI      6
1506      ABRI      6
1507       FBD      6
1508      MAPT      6
1509     MTBT1      6
1510     DDPAC      6
1511      MSTD      6
1512      SNCA      6
1513      NACP      6
1514     PARK1      6
1515     PARK4      6
1516      SNCB      6
1517     CD209      6
1518    CDSIGN      6
1519     DRPLA      6
1520     CLCN5      6
1521     CLCK2      6
1522     NPHL2      6
1523     DENTS      6
1524      OCRL      6
1525      LOCR      6
1526     OCRL1      6
1527       WT1      6
1528     PDGFB      6
1529       SIS      6
1530    DHCR24      6
1531  KIAA0018      6
1532     AVPR2      6
1533       DIR      6
1534       DI1      6
1535      AQP2      6
1536       AVP      6
1537      AVRP      6
1538        VP      6
1539     ABCC8      6
1540       SUR      6
1541      PHHI      6
1542      SUR1      6
1543      TCF1      6
1544     HNF1A      6
1545     MODY3      6
1546     SUMO4      6
1547     IDDM5      6
1548     PTPN8      6
1549       PEP      6
1550    PTPN22      6
1551       LYP      6
1552      INSR      6
1553     PPARG      6
1554    PPARG1      6
1555    PPARG2      6
1556       GCK      6
1557      GCGR      6
1558      GPD2      6
1559     HNF4A      6
1560     TCF14      6
1561     MODY1      6
1562      IRS2      6
1563  MAPK8IP1      6
1564       IB1      6
1565   NEUROD1      6
1566     NIDDM      6
1567      TCF2      6
1568      HNF2      6
1569      IRS1      6
1570    SLC2A2      6
1571     GLUT2      6
1572    SLC2A4      6
1573     GLUT4      6
1574    CAPN10      6
1575     ENPP1      6
1576     PDNP1      6
1577      NPPS      6
1578      M6S1      6
1579      PCA1      6
1580      RETN      6
1581      RSTN      6
1582     FIZZ3      6
1583     PTF1A      6
1584    KCNJ11      6
1585       BIR      6
1586      AKT2      6
1587      IPF1      6
1588     FOXP3      6
1589      IPEX      6
1590      AIID      6
1591      XPID      6
1592      PIDX      6
1593      VEGF      6
1594      DPYS      6
1595       DHP      6
1596     DMGDH      6
1597    DMGDHD      6
1598      LIG1      6
1599      TOP1      6
1600     TOP2A      6
1601      TOP2      6
1602       DBH      6
1603      CFC1      6
1604   CRYPTIC      6
1605      HTX2      6
1606       MTR      6
1607    EFEMP1      6
1608      FBNL      6
1609      DHRD      6
1610      FAAH      6
1611     SALL4      6
1612     HSAL4      6
1613     ABCC2      6
1614     CMOAT      6
1615       DYM      6
1616  FLJ90130      6
1617       DMC      6
1618       SMC      6
1619    IKBKAP      6
1620      IKAP      6
1621      ADAR      6
1622     DRADA      6
1623       DSH      6
1624     DSRAD      6
1625     GATA1      6
1626       GF1      6
1627     ERYF1      6
1628      NFE1      6
1629       FGG      6
1630      DKC1      6
1631       DKC      6
1632    DYX1C1      6
1633     DYXC1      6
1634      DYX1      6
1635  KIAA0319      6
1636      DYX2      6
1637     DYLX2      6
1638      DLX2      6
1639        F2      6
1640     HSPG2      6
1641       PLC      6
1642       SJS      4
1643       SJA      4
1644      SJS1      4
1645    ATP1A3      4
1646     DYT12      4
1647       RDP      4
1648      DYT1      4
1649     TOR1A      4
1650      GCH1      4
1651      DYT5      4
1652      DRD2      4
1653      SGCE      4
1654     DYT11      4
1655    COL7A1      4
1656       ED1      4
1657       EDA      4
1658   EDARADD      4
1659     IKBKG      4
1660      NEMO      4
1661      FIP3      4
1662       IP2      4
1663    NFKBIA      4
1664      IKBA      4
1665      EDAR      4
1666        DL      4
1667       ED3      4
1668      EDA3      4
1669      PKP1      4
1670      TNXB      4
1671       TNX      4
1672     TNXB1      4
1673     TNXBS      4
1674     TNXB2      4
1675   B4GALT7      4
1676    XGALT1      4
1677     XGPT1      4
1678    COL5A1      4
1679    COL5A2      4
1680      PLOD      4
1681     PLOD1      4
1682    COL1A2      4
1683   ADAMTS2      4
1684       NPI      4
1685     EPB41      4
1686       EL1      4
1687     SPTA1      4
1688       EVC      4
1689       LBN      4
1690      EVC2      4
1691       EMD      4
1692      EDMD      4
1693       STA      4
1694        PI      4
1695       AAT      4
1696  SERPINI1      4
1697      PI12      4
1698     COX10      4
1699     PTHR1      4
1700      PTHR      4
1701      MSH3      4
1702      TLR4      4
1703      COLQ      4
1704       EAD      4
1705     NR2E3      4
1706       PNR      4
1707      ESCS      4
1708      ENO3      4
1709     PRSS7      4
1710      ENTK      4
1711       EPX      4
1712     EVER1      4
1713       EV1      4
1714     EVER2      4
1715       EV2      4
1716   COL17A1      4
1717     BPAG2      4
1718     ITGB4      4
1719     LAMA3      4
1720      LOCS      4
1721     LAMB3      4
1722     LAMC2      4
1723    LAMNB2      4
1724    LAMB2T      4
1725     ITGA6      4
1726     KRT14      4
1727      KRT5      4
1728     PLEC1      4
1729      PLTN      4
1730      EBS1      4
1731     KRT10      4
1732      KRT9      4
1733      EPPK      4
1734     KCNQ2      4
1735      EBN1      4
1736     KCNQ3      4
1737      EBN2      4
1738     BFNC2      4
1739    GABRG2      4
1740    GEFSP3      4
1741      CAE2      4
1742      ECA2      4
1743     CLCN2      4
1744      EGMA      4
1745      ECA3      4
1746      EGI3      4
1747       JRK      4
1748       JH8      4
1749     SCN1A      4
1750    GEFSP2      4
1751      SMEI      4
1752       ME2      4
1753    GABRA1      4
1754     EPM2A      4
1755      MELF      4
1756      EPM2      4
1757    NHLRC1      4
1758     EPM2B      4
1759  SLC25A22      4
1760       GC1      4
1761    CHRNA4      4
1762     ENFL1      4
1763    CHRNB2      4
1764     EFNL3      4
1765      LGI1      4
1766       EPT      4
1767      ETL1      4
1768      CSTB      4
1769      STFB      4
1770      EPM1      4
1771      SYN1      4
1772      COMP      4
1773      EDM1      4
1774       MED      4
1775     PSACH      4
1776    COL9A3      4
1777      EDM3      4
1778       IDD      4
1779     MATN3      4
1780      EDM5      4
1781       HOA      4
1782    COL9A1      4
1783    COL9A2      4
1784      EDM2      4
1785     KCNA1      4
1786      AEMK      4
1787       EA1      4
1788     OPCML      4
1789     SCN9A      4
1790      NENA      4
1791       PN1      4
1792      HBA1      4
1793       HBB      4
1794      HBA2      4
1795      EPOR      4
1796       LOR      4
1797      GJB4      4
1798    CX30.3      4
1799      RNF6      4
1800     LZTS1      4
1801       F37      4
1802      FEZ1      4
1803      WWOX      4
1804       FOR      4
1805      ESR1      4
1806       ESR      4
1807     ETHE1      4
1808      HSCO      4
1809    D83198      4
1810      LDHA      4
1811      LDH1      4
1812      EXT2      4
1813      FZD4      4
1814      EVR1      4
1815    NPC1L1      4
1816       GLA      4
1817   FSHMD1A      4
1818    FSHD1A      4
1819       HF1      4
1820       CFH      4
1821       HUS      4
1822     MCFD2      4
1823        F7      4
1824       F10      4
1825       F11      4
1826       F12      4
1827       HAF      4
1828     F13A1      4
1829      F13A      4
1830      F13B      4
1831      MEFV      4
1832       MEF      4
1833       FMF      4
1834     FANCA      4
1835      FACA      4
1836       FA1      4
1837        FA      4
1838       FAA      4
1839    FAAP95      4
1840    FAAP90      4
1841  FLJ34064      4
1842     FANCB      4
1843     FANCC      4
1844      FACC      4
1845    FANCD2      4
1846     FANCD      4
1847      FACD      4
1848       FAD      4
1849     FANCE      4
1850      FACE      4
1851     FANCF      4
1852     XRCC9      4
1853     FANCG      4
1854      PHF9      4
1855     FANCL      4
1856     FANCM      4
1857  KIAA1596      4
1858      ASAH      4
1859        AC      4
1860     HADHA      4
1861      MTPA      4
1862      G6PD      4
1863     G6PD1      4
1864      MYCN      4
1865      NMYC      4
1866      ODED      4
1867     MODED      4
1868     GNRHR      4
1869     LHRHR      4
1870    SPINK1      4
1871      PSTI      4
1872      PCTT      4
1873      TATI      4
1874      SOS1      4
1875     GINGF      4
1876       HGF      4
1877    ANTXR2      4
1878      CMG2      4
1879       JHF      4
1880       ISH      4
1881    KIF21A      4
1882  KIAA1708      4
1883     FEOM1      4
1884    CFEOM1      4
1885    PHOX2A      4
1886      ARIX      4
1887    CFEOM2      4
1888      LCAT      4
1889      FMO3      4
1890       KNG      4
1891      DPYD      4
1892       DPD      4
1893      TSC1      4
1894       LAM      4
1895      FSHB      4
1896     TDGF1      4
1897      FMR1      4
1898     FRAXA      4
1899     FRAS1      4
1900     FREM2      4
1901      FRDA      4
1902      FARR      4
1903      FLNA      4
1904      FLN1      4
1905      ABPX      4
1906      NHBP      4
1907      OPD1      4
1908      OPD2      4
1909       FMD      4
1910      FBP1      4
1911     ALDOB      4
1912       KHK      4
1913     FUCA1      4
1914      FUT6      4
1915        FH      4
1916      RDH5      4
1917      ABAT      4
1918     GABAT      4
1919     GALK1      4
1920      GALE      4
1921      GALT      4
1922      PPGB      4
1923       GSL      4
1924      NGBE      4
1925      GLB2      4
1926      CTSA      4
1927      GAMT      4
1928      IRF1      4
1929       MAR      4
1930      IL1B      4
1931     IL1RN      4
1932      KLF6      4
1933     COPEB      4
1934      BCD1      4
1935       ZF9      4
1936       KIT      4
1937       PBT      4
1938    PDGFRA      4
1939       GBA      4
1940     ROBO3      4
1941     RBIG1      4
1942      RIG1      4
1943     HGPPS      4
1944    KCNMA1      4
1945       SLO      4
1946     SCN1B      4
1947    GEFSP1      4
1948       GAN      4
1949      GAN1      4
1950    CYP7B1      4
1951   SLC12A3      4
1952      NCCT      4
1953       TSC      4
1954    ITGA2B      4
1955      GP2B      4
1956     CD41B      4
1957     ITGB3      4
1958      GP3A      4
1959      MYOC      4
1960      TIGR      4
1961     GLC1A      4
1962      JOAG      4
1963      GPOA      4
1964      OPTN      4
1965     GLC1E      4
1966      FIP2      4
1967      HYPL      4
1968       NRP      4
1969    CYP1B1      4
1970     GLC3A      4
1971      OPA1      4
1972       NTG      4
1973       NPG      4
1974     DMBT1      4
1975     ACTN4      4
1976     FSGS1      4
1977      FSGS      4
1978     TRPC6      4
1979      TRP6      4
1980     FSGS2      4
1981     CD2AP      4
1982       CMS      4
1983      GLML      4
1984       GVM      4
1985    VMGLOM      4
1986      MRAP      4
1987      FALP      4
1988  C21orf61      4
1989      MC2R      4
1990    SLC5A1      4
1991     SGLT1      4
1992    SLC2A1      4
1993     GLUT1      4
1994      GCS1      4
1995      FTCD      4
1996      GCDH      4
1997      ETFA      4
1998       GA2      4
1999      MADD      4
2000      ETFB      4
2001     ETFDH      4
2002       GSS      4
2003      GSHS      4
2004        GK      4
2005       AMT      4
2006       NKH      4
2007       GCE      4
2008      GCSH      4
2009      GLDC      4
2010     HYGN1      4
2011      GCSP      4
2012      GNMT      4
2013     PHKG2      4
2014     PHKA2      4
2015       PHK      4
2016      G6PC      4
2017      G6PT      4
2018     G6PT1      4
2019       GAA      4
2020     LAMP2      4
2021     LAMPB      4
2022       AGL      4
2023       GDE      4
2024      GBE1      4
2025      GYS2      4
2026      PYGL      4
2027      PFKM      4
2028      GLB1      4
2029      GM2A      4
2030      HEXA      4
2031       TSD      4
2032   TMEM16E      4
2033      GDD1      4
2034       TPO      4
2035       TPX      4
2036  KIAA1279      4
2037       DHH      4
2038       SRY      4
2039       TDF      4
2040     BCS1L      4
2041     FLNMS      4
2042   GRACILE      4
2043      IL10      4
2044      CSIF      4
2045     CTLA4      4
2046        GC      4
2047       DBP      4
2048       LBR      4
2049       PHA      4
2050     MYO5A      4
2051     MYH12      4
2052       GS1      4
2053    RAB27A      4
2054       RAM      4
2055       GS2      4
2056      MLPH      4
2057     GHRHR      4
2058    STAT5B      4
2059      IGF1      4
2060    HOXA13      4
2061     HOX1J      4
2062       OAT      4
2063    ATP2C1      4
2064      BCPM      4
2065       HHD      4
2066      CTSC      4
2067      CPPI      4
2068      PALS      4
2069       PLS      4
2070       HMS      4
2071     PANK2      4
2072     NBIA1      4
2073      PKAN      4
2074      HARP      4
2075   SLC6A19      4
2076       HND      4
2077      WFS1      4
2078      WFRS      4
2079       WFS      4
2080     DFNA6      4
2081       VHL      4
2082      FLT4      4
2083    VEGFR3      4
2084       PCL      4
2085       KDR      4
2086      ELA2      4
2087     HMOX1      4
2088       HFE      4
2089     HLA-H      4
2090      HFE1      4
2091      HAMP      4
2092     LEAP1      4
2093      HEPC      4
2094      HFE2      4
2095       HJV      4
2096     HFE2A      4
2097      TFR2      4
2098      HFE3      4
2099   SLC40A1      4
2100   SLC11A3      4
2101      FPN1      4
2102     IREG1      4
2103      HFE4      4
2104       AK1      4
2105      BPGM      4
2106      GCLC      4
2107     GLCLC      4
2108       GPI      4
2109       HK1      4
2110      PGK1      4
2111      PGKA      4
2112      TPI1      4
2113      PRF1      4
2114     HPLH2      4
2115    UNC13D      4
2116  MUNC13-4      4
2117     HPLH3      4
2118      HLH3      4
2119      FHL3      4
2120        F8      4
2121       F8C      4
2122      HEMA      4
2123        F9      4
2124      HEMB      4
2125        F5      4
2126     SCOD1      4
2127      SCO1      4
2128      LIPC      4
2129     AXIN1      4
2130      AXIN      4
2131     IGF2R      4
2132      MPRI      4
2133       MET      4
2134       ENG      4
2135       END      4
2136      HHT1      4
2137       ORW      4
2138    ACVRL1      4
2139   ACVRLK1      4
2140      ALK1      4
2141      HHT2      4
2142       AFP      4
2143     HPAFP      4
2144      HPS1      4
2145      HPS3      4
2146      HPS4      4
2147      HPS5      4
2148       RU2      4
2149  KIAA1017      4
2150      HPS6      4
2151        RU      4
2152     AP3B1      4
2153    ADTB3A      4
2154      HPS2      4
2155    DTNBP1      4
2156      HPS7      4
2157      ZIC3      4
2158      HTX1      4
2159       HTX      4
2160      NRTN      4
2161       NTN      4
2162      ECE1      4
2163       HAL      4
2164      HSTD      4
2165      CCL5      4
2166     SCYA5      4
2167  D17S136E      4
2168    TCP228      4
2169    CMKBR2      4
2170      CCR2      4
2171    CMKBR5      4
2172    CCCKR5      4
2173     HMGCL      4
2174    HMGCS2      4
2175      HLCS      4
2176       HCS      4
2177      SIX3      4
2178      HPE2      4
2179      TGIF      4
2180      HPE4      4
2181      ZIC2      4
2182      HPE5      4
2183      TBX5      4
2184       CBS      4
2185     MTHFR      4
2186      MTRR      4
2187      HBG1      4
2188      HBG2      4
2189     HPRT1      4
2190      HPRT      4
2191        HD      4
2192      IT15      4
2193      JPH3      4
2194       JP3      4
2195      HDL2      4
2196       TBP      4
2197     SCA17      4
2198      PYCS      4
2199      GSAS      4
2200     PPARA      4
2201      PPAR      4
2202       SAC      4
2203      HCA2      4
2204      BAAT      4
2205     EPHX1      4
2206      TJP2      4
2207       ZO2      4
2208      LDLR      4
2209       FHC      4
2210     PCSK9      4
2211     NARC1      4
2212   HCHOLA3      4
2213       FH3      4
2214       ARH      4
2215     FHCB2      4
2216     FHCB1      4
2217     EPHX2      4
2218      GSBS      4
2219     ITIH4      4
2220     PK120      4
2221    ITIHL1      4
2222     GLRA1      4
2223      STHE      4
2224      GLRB      4
2225       MVK      4
2226      MVLK      4
2227     GLUD1      4
2228      USF1      4
2229   HYPLIP1      4
2230     APOC2      4
2231      AASS      4
2232     MAT1A      4
2233     MATA1      4
2234     SAMS1      4
2235      AHCY      4
2236      SAHH      4
2237  SLC25A15      4
2238     ORNT1      4
2239       HHH      4
2240      AGXT      4
2241      SPAT      4
2242     GRHPR      4
2243      GLXR      4
2244     HRPT2      4
2245   C1orf28      4
2246      CASR      4
2247      HHC1      4
2248     PCAR1      4
2249       FIH      4
2250      PCBD      4
2251      DCOH      4
2252       PAH      4
2253      PKU1      4
2254       INS      4
2255     PRODH      4
2256    PRODH2      4
2257     SCZD4      4
2258   ALDH4A1      4
2259     ALDH4      4
2260     P5CDH      4
2261       REN      4
2262    KCNMB1      4
2263     NR3C2      4
2264       MLR      4
2265       MCR      4
2266     AGTR1      4
2267    AGTR1A      4
2268     AT2R1      4
2269     PTGIS      4
2270    CYP8A1      4
2271      PGIS      4
2272      CYP8      4
2273      ADD1      4
2274       AGT      4
2275  SERPINA8      4
2276      GNB3      4
2277    CYP3A5      4
2278  P450PCN3      4
2279      TSHR      4
2280     APOA5      4
2281      LIPI      4
2282      LPDL      4
2283     PRED5      4
2284       RP1      4
2285      ORP1      4
2286      UMOD      4
2287      HNFJ      4
2288      FJHN      4
2289     MCKD2      4
2290   ADMCKD2      4
2291      PAX9      4
2292      BLNK      4
2293     SLP65      4
2294       LHB      4
2295     GPR54      4
2296      NELF      4
2297     LHCGR      4
2298   CACNA1S      4
2299  CACNL1A3      4
2300   CCHL1A3      4
2301     KCNE3      4
2302     HOKPP      4
2303       LCT      4
2304       LAC      4
2305       LPH      4
2306      MCM6      4
2307     FXYD2      4
2308    ATP1G1      4
2309     HOMG2      4
2310    CLDN16      4
2311     PCLN1      4
2312     TRPM6      4
2313     CHAK2      4
2314       PTH      4
2315      GCMB      4
2316      TBCE      4
2317       KCS      4
2318      KCS1      4
2319       HRD      4
2320     GATA3      4
2321       HDR      4
2322      ALPL      4
2323      HOPS      4
2324    TNSALP      4
2325      PHEX      4
2326       HYP      4
2327     HPDR1      4
2328    SLC5A5      4
2329       NIS      4
2330     DUOX2      4
2331     THOX2      4
2332      PAX8      4
2333      TSHB      4
2334      CDH3      4
2335      CDHP      4
2336      PCAD      4
2337      HJMD      4
2338      DSG4      4
2339       LAH      4
2340     SOX18      4
2341      HLTS      4
2342      CDSN      4
2343      HTSS      4
2344  SLC22A12      4
2345     OAT4L      4
2346     URAT1      4
2347      TGM1      4
2348      ICR2      4
2349       LI1      4
2350   ALOX12B      4
2351    ALOXE3      4
2352     KRT2A      4
2353     KRT2E      4
2354     ICHYN      4
2355    ABCA12      4
2356     ICR2B      4
2357       LI2      4
2358       STS      4
2359     ARSC1      4
2360      ARSC      4
2361      SSDD      4
2362      ICOS      4
2363     AILIM      4
2364     IGHG2      4
2365    FCGR1A      4
2366     IGFR1      4
2367      CD64      4
2368    DNMT3B      4
2369       ICF      4
2370      CD3E      4
2371      CD3G      4
2372     AICDA      4
2373       AID      4
2374     HIGM2      4
2375   TNFRSF5      4
2376      CD40      4
2377       UNG      4
2378       DGU      4
2379     HIGM4      4
2380    TNFSF5      4
2381    CD40LG      4
2382     HIGM1      4
2383       IGM      4
2384 TNFRSF14B      4
2385      TACI      4
2386      MYH2      4
2387       GNE      4
2388     GLCNE      4
2389      IBM2      4
2390      DMRV      4
2391        NM      4
2392       VCP      4
2393    IBMPFD      4
2394       ARX      4
2395      ISSX      4
2396      PRTS      4
2397     MRXS1      4
2398     MRX36      4
2399     MRX54      4
2400      SOX3      4
2401      MRGH      4
2402      ITPA      4
2403     NTRK1      4
2404      TRKA      4
2405       MTC      4
2406    GABRB3      4
2407   PPP1R3A      4
2408    PPP1R3      4
2409     PTPN1      4
2410     PTP1B      4
2411     IL2RA      4
2412      IL2R      4
2413     IGF1R      4
2414      IGF2      4
2415       GIF      4
2416     IRAK4      4
2417     REN64      4
2418     PITX2      4
2419      IDG2      4
2420     RIEG1      4
2421       RGS      4
2422     IGDS2      4
2423      FTH1      4
2424     FTHL6      4
2425       GH1      4
2426       GHN      4
2427       IVD      4
2428     FGFR1      4
2429      FLT2      4
2430      KAL2      4
2431     KCNE1      4
2432      JLNS      4
2433      LQT5      4
2434     NPHP1      4
2435      NPH1      4
2436     SLSN1      4
2437      AHI1      4
2438     MADH4      4
2439      DPC4      4
2440     SMAD4      4
2441       JIP      4
2442      KLK1      4
2443      KLKR      4
2444      KAL1      4
2445     ADMLX      4
2446      NAGA      4
2447       IL6      4
2448     IFNB2      4
2449      BSF2      4
2450      IGKC      4
2451    DNAH11      4
2452   DNAHC11      4
2453       SAT      4
2454      SSAT      4
2455      KFSD      4
2456      DSG1      4
2457      SCOT      4
2458      OXCT      4
2459       MGP      4
2460       NTI      4
2461     KIND1      4
2462      URP1      4
2463  C20orf42      4
2464      VG5Q      4
2465  HUS84971      4
2466  FLJ10283      4
2467   COL18A1      4
2468       KNO      4
2469      GALC      4
2470    L2HGDH      4
2471 C14orf160      4
2472      LDHB      4
2473      PDX1      4
2474      SHOX      4
2475      GCFX      4
2476      PHOG      4
2477     SHOXY      4
2478       GHR      4
2479     SC5DL      4
2480      ERG3      4
2481      ALAD      4
2482      AGRP      4
2483       ART      4
2484      AGRT      4
2485      CRB1      4
2486      RP12      4
2487     RPE65      4
2488      RP20      4
2489     RDH12      4
2490      LCA3      4
2491    ACVR2B      2
2492      EBAF      2
2493     TGFB4      2
2494    LEFTY2      2
2495     LEFTA      2
2496    LEFTYA      2
2497      DTNA      2
2498  D18S892E      2
2499      DRP3      2
2500     LVNC1      2
2501      TLR5      2
2502      TIL3      2
2503       DLD      2
2504       LAD      2
2505      PHE3      2
2506    NDUFS3      2
2507    NDUFS4      2
2508      AQDQ      2
2509    NDUFS7      2
2510      PSST      2
2511    NDUFS8      2
2512      SDHA      2
2513      SDH2      2
2514      SDHF      2
2515     SURF1      2
2516    LRPPRC      2
2517    LRP130      2
2518      LSFC      2
2519     PDHA1      2
2520     PHE1A      2
2521    COL4A6      2
2522    PTPN11      2
2523     PTP2C      2
2524      SHP2      2
2525       NS1      2
2526      TAL1      2
2527      TCL5      2
2528       SCL      2
2529      TAL2      2
2530      FLT3      2
2531      NBS1      2
2532       NBS      2
2533   ZNFN1A1      2
2534       IK1      2
2535      LYF1      2
2536     HOXD4      2
2537     HOX4B      2
2538       BCR      2
2539       CML      2
2540       PHL      2
2541       ALL      2
2542      ARNT      2
2543      GMPS      2
2544      AF10      2
2545  ARHGEF12      2
2546      LARG      2
2547  KIAA0382      2
2548      CALM      2
2549      CLTH      2
2550     CEBPA      2
2551      CEBP      2
2552     CHIC2      2
2553       BTL      2
2554       LPP      2
2555      NPM1      2
2556    NUP214      2
2557    D9S46E      2
2558       CAN      2
2559      CAIN      2
2560     RUNX1      2
2561     CBFA2      2
2562      AML1      2
2563   WHSC1L1      2
2564      NSD3      2
2565      AF1Q      2
2566     NUMA1      2
2567    ZNF145      2
2568      PLZF      2
2569       PML      2
2570       MYL      2
2571     ARL11      2
2572    ARLTS1      2
2573     P2RX7      2
2574      P2X7      2
2575      GRAF      2
2576       NF1      2
2577      VRNF      2
2578       WSS      2
2579      NFNS      2
2580      BCL2      2
2581      TCRA      2
2582      ABL1      2
2583     ITGB2      2
2584      CD18      2
2585     LCAMB      2
2586    EIF2B1      2
2587    EIF2BA      2
2588    EIF2B2      2
2589    EIF2B3      2
2590    EIF2B5      2
2591      LVWM      2
2592      CACH      2
2593       CLE      2
2594    EIF2B4      2
2595    SCNN1B      2
2596    SCNN1G      2
2597      PHA1      2
2598    CDKN2A      2
2599      MTS1      2
2600       P16      2
2601       MLM      2
2602      CMM2      2
2603      LIG4      2
2604    AGPAT2      2
2605     LPAAB      2
2606      BSCL      2
2607     BSCL1      2
2608     BSCL2      2
2609     SPG17      2
2610  PPARGC1A      2
2611   PPARGC1      2
2612      STAR      2
2613    CYP11A      2
2614   P450SCC      2
2615      ECM1      2
2616     HMGA2      2
2617     HMGIC      2
2618      BABL      2
2619      LIPO      2
2620  PAFAH1B1      2
2621      LIS1      2
2622      RELN      2
2623        RL      2
2624       DCX      2
2625      DBCN      2
2626      LISX      2
2627    TGFBR1      2
2628    AKAP10      2
2629      ANK2      2
2630      LQT4      2
2631     KCNJ2      2
2632    HHIRK1      2
2633    KIR2.1      2
2634      IRK1      2
2635      LQT7      2
2636       LPA      2
2637      CILP      2
2638   PPP2R1B      2
2639    MAP3K8      2
2640       COT      2
2641       EST      2
2642      TPL2      2
2643    FCGR2A      2
2644     IGFR2      2
2645      CD32      2
2646      TSC2      2
2647     FOXC2      2
2648    FKHL14      2
2649      MFH1      2
2650  RAP1GDS1      2
2651      BCL8      2
2652    FCGR2B      2
2653    MAD1L1      2
2654   TXBP181      2
2655    SH2D1A      2
2656      IMD5      2
2657       XLP      2
2658      XLPD      2
2659    SLC7A7      2
2660       LPI      2
2661     ATXN3      2
2662       MJD      2
2663      SCA3      2
2664     CHST6      2
2665     MCDC1      2
2666     HMCN1      2
2667     FBLN6      2
2668     FIBL6      2
2669    ELOVL4      2
2670      ADMD      2
2671     STGD2      2
2672     STGD3      2
2673      VMD2      2
2674     FKBP5      2
2675    FKBP51      2
2676      CD36      2
2677     ICAM1      2
2678     NOS2A      2
2679      NOS2      2
2680     MLYCD      2
2681       MCD      2
2682     MALT1      2
2683       MLT      2
2684  ZMPSTE24      2
2685     FACE1      2
2686     STE24      2
2687      MADB      2
2688    MAN2B1      2
2689      MANB      2
2690     MANBA      2
2691     MANB1      2
2692    BCKDHA      2
2693     MSUD1      2
2694    BCKDHB      2
2695       E1B      2
2696       DBT      2
2697    BCATE2      2
2698      ARSB      2
2699      MPS6      2
2700   COL11A1      2
2701      STL2      2
2702     MASP2      2
2703     ACP33      2
2704      MAST      2
2705     SPG21      2
2706      PYGM      2
2707        XK      2
2708      SUFU      2
2709    SUFUXL      2
2710     SUFUH      2
2711     KRT12      2
2712      KRT3      2
2713      MKL1      2
2714      AMKL      2
2715       MAL      2
2716      MLC1      2
2717       LVM      2
2718        VL      2
2719      CUBN      2
2720      IFCR      2
2721      MGA1      2
2722      CDK4      2
2723      CMM3      2
2724     STK11      2
2725       PJS      2
2726      LKB1      2
2727    SLURP1      2
2728       MDM      2
2729       MN1      2
2730      MGCR      2
2731       NF2      2
2732    PRSS12      2
2733     BSSP3      2
2734      CRBN      2
2735     MRT2A      2
2736      PAK3      2
2737     MRX30      2
2738     MRX47      2
2739   IL1RAPL      2
2740     MRX34      2
2741     FTSJ1      2
2742      JM23      2
2743      SPB1      2
2744     MRX44      2
2745      MRX9      2
2746     ZNF81      2
2747     MRX45      2
2748    TM4SF2      2
2749      MXS1      2
2750       A15      2
2751     OPHN1      2
2752      FMR2      2
2753     FRAXE      2
2754      MRX2      2
2755      SMCX      2
2756      MRXJ      2
2757  DXS1272E      2
2758     XE169      2
2759   JARID1C      2
2760      GDI1      2
2761   RABGD1A      2
2762     MRX41      2
2763     MRX48      2
2764     FACL4      2
2765      ACS4      2
2766     MRX63      2
2767   ARHGEF6      2
2768     MRX46      2
2769     COOL2      2
2770     AGTR2      2
2771     ZNF41      2
2772      DLG3      2
2773     NEDLG      2
2774    SAP102      2
2775       MRX      2
2776       SMS      2
2777       SRS      2
2778      MRSR      2
2779     CYP2C      2
2780   CYP2C19      2
2781      ARSA      2
2782   COL10A1      2
2783      CYB5      2
2784      DIA1      2
2785   ALDH6A1      2
2786     MMSDH      2
2787       MUT      2
2788       MCM      2
2789      MMAA      2
2790      MMAB      2
2791    RFXANK      2
2792  SLC25A19      2
2793       DNC      2
2794      MUP1      2
2795     MCPHA      2
2796     MCPH1      2
2797  CDK5RAP2      2
2798  KIAA1633      2
2799     MCPH3      2
2800      ASPM      2
2801     MCPH5      2
2802     CEMPJ      2
2803      CPAP      2
2804     MCPH6      2
2805     LAMB2      2
2806      LAMS      2
2807     CHX10      2
2808     HOX10      2
2809      SIX6      2
2810      BCOR      2
2811  KIAA1575      2
2812      MAA2      2
2813     ANOP2      2
2814     EDNRA      2
2815     YWHAE      2
2816      MDCR      2
2817       MDS      2
2818    NDUFS1      2
2819    NDUFS2      2
2820     UQCRB      2
2821      UQBP      2
2822       QPC      2
2823       TK2      2
2824    SUCLA2      2
2825     DGUOK      2
2826       DGK      2
2827      PUS1      2
2828     MLASA      2
2829      DYSF      2
2830    LGMD2B      2
2831     MOCS1      2
2832     MOCOD      2
2833     MOCS2      2
2834      MPTS      2
2835       GPH      2
2836  KIAA1385      2
2837      GEPH      2
2838    KRTHB1      2
2839    KRTHB6      2
2840       HB6      2
2841    ZFHX1B      2
2842   SMADIP1      2
2843      SIP1      2
2844     MYMY3      2
2845     MAML2      2
2846      MAM3      2
2847     MECT1      2
2848  KIAA0616      2
2849    GNPTAB      2
2850     GNPTA      2
2851    GNPTAG      2
2852    MCOLN1      2
2853       ML4      2
2854      IDUA      2
2855       IDA      2
2856       IDS      2
2857      MPS2      2
2858      SIDS      2
2859     GALNS      2
2860     MPS4A      2
2861       GNS      2
2862       G6S      2
2863     HYAL1      2
2864      GUSB      2
2865      MPS7      2
2866    TRIM37      2
2867       MUL      2
2868  KIAA0898      2
2869      IRF4      2
2870     LSIRF      2
2871     PTPRC      2
2872      CD45      2
2873       LCA      2
2874     SUMF1      2
2875       FGE      2
2876   POMGNT1      2
2877       MEB      2
2878     PHKA1      2
2879      GDF8      2
2880      MSTN      2
2881      FKRP      2
2882     MDC1C      2
2883    LGMD2I      2
2884     LAMA2      2
2885      LAMM      2
2886     LARGE      2
2887  KIAA0609      2
2888     MDC1D      2
2889      FCMD      2
2890      TTID      2
2891      MYOT      2
2892     CAPN3      2
2893     CANP3      2
2894      SGCG      2
2895    LGMD2C      2
2896     DMDA1      2
2897      SCG3      2
2898      SGCA      2
2899       ADL      2
2900      DAG2      2
2901    LGMD2D      2
2902     DMDA2      2
2903      SGCB      2
2904    LGMD2E      2
2905    TRIM32      2
2906      HT2A      2
2907    LGMD2H      2
2908     POMT1      2
2909     SEPN1      2
2910      SELN      2
2911     RSMD1      2
2912    CMS1A1      2
2913      FIM1      2
2914    CHRNB1      2
2915     ACHRB      2
2916     SCCMS      2
2917     CMS2A      2
2918     CMS1D      2
2919     CHRNE      2
2920     FCCMS      2
2921     CMS1E      2
2922     RAPSN      2
2923      CHAT      2
2924    CMS1A2      2
2925    CHRNA1      2
2926     ACHRD      2
2927     CHRND      2
2928   IL12RB1      2
2929    IFNGR2      2
2930    IFNGT1      2
2931     IFGR2      2
2932     STAT1      2
2933    NRAMP1      2
2934     NRAMP      2
2935      MDS1      2
2936     FACL6      2
2937      ACS2      2
2938      JAK2      2
2939      CBFB      2
2940     CSF1R      2
2941       FMS      2
2942     CXCR4      2
2943   D2S201E      2
2944     NPY3R      2
2945      WHIM      2
2946    PDGFRB      2
2947     PDGFR      2
2948     AMPD1      2
2949   ALOX5AP      2
2950      FLAP      2
2951    LGALS2      2
2952       LTA      2
2953      TNFB      2
2954      OLR1      2
2955      LOX1      2
2956      THBD      2
2957      THRM      2
2958      GCLM      2
2959     GLCLR      2
2960    TNFSF4      2
2961      GP34      2
2962     OX4OL      2
2963     EFHC1      2
2964  FLJ10466      2
2965      EJM1      2
2966     ECGF1      2
2967     ACTA1      2
2968      ASMA      2
2969      NEM3      2
2970      NEM1      2
2971     ITGA7      2
2972     PGAM2      2
2973     PGAMM      2
2974     CLCN1      2
2975      DMPK      2
2976        DM      2
2977       DMK      2
2978      ZNF9      2
2979     CNBP1      2
2980       DM2      2
2981     PROMM      2
2982      MTM1      2
2983      MTMX      2
2984     DDIT3      2
2985   GADD153      2
2986    CHOP10      2
2987      NAGS      2
2988     LMX1B      2
2989      NPS1      2
2990       NHS      2
2991      HCRT      2
2992        OX      2
2993     TREM2      2
2994    TYROBP      2
2995     PLOSL      2
2996     DAP12      2
2997       JUP      2
2998       DP3      2
2999      PDGB      2
3000      TPM3      2
3001       NEB      2
3002      NEM2      2
3003     TNNT1      2
3004       ANM      2
3005     CLDN1      2
3006     SEMP1      2
3007    ZNF365      2
3008       UAN      2
3009      INVS      2
3010       INV      2
3011     NPHP2      2
3012      NPH2      2
3013     NPHP4      2
3014     SLSN4      2
3015     NPHP3      2
3016      NPH3      2
3017     CD151      2
3018     PETA3      2
3019      SFA1      2
3020     NPHS1      2
3021      NPHN      2
3022      PDCN      2
3023     NPHS2      2
3024      SRN1      2
3025     MTHFD      2
3026     MTHFC      2
3027      NME1      2
3028      NM23      2
3029      MXI1      2
3030     HSPB8      2
3031       H11      2
3032     E2IG1      2
3033     DHMN2      2
3034    SPTLC1      2
3035      LBC1      2
3036      SPT1      2
3037      HSN1      2
3038      HSAN      2
3039      NGFB      2
3040     HSAN5      2
3041      HSN2      2
3042    FCGR3A      2
3043      CD16      2
3044     IGFR3      2
3045      GFI1      2
3046    ZNF163      2
3047       WAS      2
3048      IMD2      2
3049       THC      2
3050      RAC2      2
3051     GPR51      2
3052    GABBR2      2
3053     SMPD1      2
3054       NPD      2
3055      NPC1      2
3056       NPC      2
3057      NPC2      2
3058       HE1      2
3059     GNAT1      2
3060     CSNB1      2
3061       NYX      2
3062     PDE6B      2
3063      PDEB      2
3064     CSNB3      2
3065   CACNA1F      2
3066     CSNB2      2
3067       RHO      2
3068       RP4      2
3069      OPN2      2
3070        NP      2
3071      POMC      2
3072      MC4R      2
3073    AKR1C2      2
3074      DDH2      2
3075       DD2      2
3076     HAKRD      2
3077     NTRK2      2
3078      TRKB      2
3079     NR0B2      2
3080       SHP      2
3081       LEP      2
3082        OB      2
3083      LEPR      2
3084       OBR      2
3085      SIM1      2
3086      UCP3      2
3087      MC3R      2
3088   SLC6A14      2
3089       OBX      2
3090     ADRB3      2
3091      CART      2
3092      GHRL      2
3093      UCP1      2
3094      UCP2      2
3095     PCSK1      2
3096      NEC1      2
3097       PC1      2
3098       PC3      2
3099       OA1      2
3100      MATP      2
3101      AIM1      2
3102    PABPN1      2
3103     PABP2      2
3104      PAB2      2
3105       SAG      2
3106      RHOK      2
3107        RK      2
3108      GRK1      2
3109   DCLRE1C      2
3110   ARTEMIS      2
3111     SCIDA      2
3112      RAG1      2
3113      RAG2      2
3114      MID1      2
3115      OGS1      2
3116     BBBG1      2
3117       FXY      2
3118       OSX      2
3119      PAX2      2
3120      OFD1      2
3121    CXorf5      2
3122       OTC      2
3123      IRF6      2
3124       VWS      2
3125       LPS      2
3126       PIT      2
3127       PPS      2
3128      OFC6      2
3129      UMPS      2
3130      OPRT      2
3131    SLC6A2      2
3132      NAT1      2
3133      NET1      2
3134      FRZB      2
3135     FRZB1      2
3136     SRFP3      2
3137      ASPN      2
3138     PLAP1      2
3139 TNFRSF11A      2
3140      RANK      2
3141      ODFR      2
3142       OFE      2
3143      MMP2      2
3144     CLG4A      2
3145      MONA      2
3146     CLCN7      2
3147      CLC7      2
3148     OPTA2      2
3149     OSTM1      2
3150        GL      2
3151    TCIRG1      2
3152     TIRC7      2
3153     OC116      2
3154     OPTB1      2
3155     CALCA      2
3156     CALC1      2
3157   SLC17A2      2
3158      NPT2      2
3159     CALCR      2
3160       CRT      2
3161       RIL      2
3162     RRAS2      2
3163      TC21      2
3164      FSHR      2
3165      ODG1      2
3166     BMP15      2
3167     GDF9B      2
3168      ODG2      2
3169     KRT17      2
3170       PC2      2
3171     PCHC1      2
3172     KRT6B      2
3173     KRT16      2
3174     KRT6A      2
3175 TNFRSF11B      2
3176       OPG      2
3177      OCIF      2
3178    SQSTM1      2
3179       P62      2
3180      PDB3      2
3181     ARMET      2
3182       ARP      2
3183    ACVR1B      2
3184   ACVRLK4      2
3185      ALK4      2
3186     RBBP8      2
3187       RIM      2
3188     PRSS1      2
3189      TRY1      2
3190      SDHB      2
3191      SDH1      2
3192     SDHIP      2
3193      SDHC      2
3194      PGL3      2
3195      ALX4      2
3196      PFM2      2
3197       FPP      2
3198     NR4A2      2
3199     NURR1      2
3200       NOT      2
3201     TINUR      2
3202    SNCAIP      2
3203       DJ1      2
3204     PARK7      2
3205     LRRK2      2
3206     PARK8      2
3207     PINK1      2
3208     PARK6      2
3209     UCHL1      2
3210     PARK5      2
3211    NDUFV2      2
3212      PIGA      2
3213       MR1      2
3214   TAHCCP2      2
3215  KIPP1184      2
3216     BRP17      2
3217      PNKD      2
3218      FPD1      2
3219       PDC      2
3220      DYT8      2
3221     SOX10      2
3222       WS4      2
3223      PLP1      2
3224       PMD      2
3225     GJA12      2
3226      CX47      2
3227    PMLDAR      2
3228  TNFRSF1A      2
3229     TNFR1      2
3230     TNFAR      2
3231       FPF      2
3232   ARFGEF2      2
3233      BIG2      2
3234      PEX6      2
3235    PXAAA1      2
3236      PAF2      2
3237     PEX12      2
3238       AMH      2
3239       MIF      2
3240     AMHR2      2
3241      AMHR      2
3242      QDPR      2
3243      DHPR      2
3244       PTS      2
3245   TAS2R38      2
3246     T2R61      2
3247       PTC      2
3248     PHGDH      2
3249     PRPS1      2
3250      PHKB      2
3251       PSP      2
3252     GNAI2      2
3253    GNAI2B      2
3254       GIP      2
3255      THRA      2
3256     ERBA1      2
3257     THRA1      2
3258      GLI2      2
3259    POU1F1      2
3260      PIT1      2
3261     PROP1      2
3262     HESX1      2
3263       RPX      2
3264      LHX3      2
3265     PRKCA      2
3266      PKCA      2
3267       PLI      2
3268  SERPINF2      2
3269    P2RY12      2
3270     P2Y12      2
3271     SFTPC      2
3272     SFTP2      2
3273      FCYT      2
3274     PKHD1      2
3275     ARPKD      2
3276      PKD1      2
3277      PKD2      2
3278      PKD4      2
3279     PKDTS      2
3280    PRKCSH      2
3281     G19P1      2
3282      PCLD      2
3283     SEC63      2
3284     GPR56      2
3285    TM7XN1      2
3286      BFPP      2
3287    COL4A1      2
3288      HMBS      2
3289      PBGD      2
3290       UPS      2
3291      UROS      2
3292      UROD      2
3293      PPOX      2
3294       NDN      2
3295     SNRPN      2
3296     STOX1      2
3297      PEE4      2
3298     KLKB1      2
3299      KLK3      2
3300    DIAPH2      2
3301       DIA      2
3302      POF2      2
3303   C10orf2      2
3304   TWINKLE      2
3305      PEO1      2
3306   SLC25A4      2
3307      ANT1      2
3308        T1      2
3309      PEO3      2
3310      PEPD      2
3311       PFC      2
3312       PFD      2
3313      PCCA      2
3314      PCCB      2
3315    RNASEL      2
3316      RNS4      2
3317     PRCA1      2
3318      HPC1      2
3319      MSR1      2
3320     EPHB2      2
3321     EPHT3      2
3322       DRT      2
3323       ERK      2
3324     ATBF1      2
3325     ELAC2      2
3326      HPC2      2
3327     PROS1      2
3328      FECH      2
3329       FCE      2
3330   HSD17B3      2
3331   EDH17B3      2
3332    SCNN1A      2
3333      WNK4      2
3334   PRKWNK4      2
3335     PHA2B      2
3336      WNK1      2
3337   PRKWNK1      2
3338       KDP      2
3339     PHA2C      2
3340    SRD5A2      2
3341   CYP27B1      2
3342      PDDR      2
3343      VDD1      2
3344     ABCC6      2
3345       ARA      2
3346     ABC34      2
3347      MLP1      2
3348       PXE      2
3349    PSORS6      2
3350    CSF2RB      2
3351     SFTPB      2
3352     SFTB3      2
3353    SFTPA1      2
3354     SFTP1      2
3355     BMPR2      2
3356      PPH1      2
3357      CTSK      2
3358      NOS1      2
3359   PSTPIP1      2
3360    PSTPIP      2
3361    CD2BP1      2
3362     PAPAS      2
3363        PC      2
3364      PDHB      2
3365    HOXA11      2
3366     HOX1I      2
3367    RECQL4      2
3368       RTS      2
3369     RECQ4      2
3370    CX3CR1      2
3371     GPR13      2
3372       V28      2
3373      PEX7      2
3374     RCDP1      2
3375      PHYH      2
3376      PAHX      2
3377     PXMP3      2
3378      PAF1      2
3379     PMP35      2
3380      PEX2      2
3381      TRC8      2
3382      RCA1      2
3383     HRCA1      2
3384      OGG1      2
3385      PRCC      2
3386     RCCP1      2
3387      TFE3      2
3388    SLC5A2      2
3389     SGLT2      2
3390  ATP6V0A4      2
3391   ATP6N1B      2
3392      VPP2      2
3393     RTA1C      2
3394     RTADR      2
3395       CA2      2
3396    SLC4A4      2
3397      NBC1      2
3398      KNBC      2
3399    SLC4A5      2
3400    ATP6B1      2
3401      VPP3      2
3402     PQBP1      2
3403     NPW38      0
3404     MRX55      0
3405     RENS1      0
3406     MRXS8      0
3407     OPRM1      0
3408       NRL      0
3409   D14S46E      0
3410      RP27      0
3411     PROM1      0
3412    PROML1      0
3413     AC133      0
3414   C1QTNF5      0
3415     CTRP5      0
3416      LORD      0
3417      LRAT      0
3418    IMPDH1      0
3419    PRPF31      0
3420     PRP31      0
3421     PRPF8      0
3422     PRPC8      0
3423      RP13      0
3424     TULP1      0
3425      RP14      0
3426       CA4      0
3427      RP17      0
3428     HPRP3      0
3429      RP18      0
3430       RP2      0
3431     CERKL      0
3432     FSCN2      0
3433      RFSN      0
3434       RP9      0
3435     USH2A      0
3436       RGR      0
3437     CNGB1      0
3438    CNCG3L      0
3439     CNCG2      0
3440     CNGA1      0
3441     CNCG1      0
3442     PDE6A      0
3443      PDEA      0
3444      ROM1      0
3445     ROSP1      0
3446     MERTK      0
3447      RBP4      0
3448       RS1      0
3449     XLRS1      0
3450     CDKL5      0
3451      STK9      0
3452   SMARCB1      0
3453      SNF5      0
3454      INI1      0
3455       RDT      0
3456    FOXO1A      0
3457      FKHR      0
3458      PAX7      0
3459   NFKBIL1      0
3460     PADI4      0
3461     PADI5      0
3462       PAD      0
3463   SLC22A4      0
3464     OCTN1      0
3465      AGPS      0
3466    ADHAPS      0
3467       RHD      0
3468      RPIA      0
3469       RPI      0
3470    CYP2R1      0
3471       VDR      0
3472     ESCO2      0
3473      WNT4      0
3474    CREBBP      0
3475      RSTS      0
3476     TWIST      0
3477      ACS3      0
3478       SCS      0
3479   SLC17A5      0
3480     SIASD      0
3481       SLD      0
3482      HEXB      0
3483      SGSH      0
3484     MPS3A      0
3485      SFMD      0
3486     NAGLU      0
3487     BTNL2      0
3488  HLA-DR1B      0
3489      SSX1      0
3490      SSRC      0
3491      SSX2      0
3492  SMARCAL1      0
3493      SIOD      0
3494      EMX2      0
3495     DISC1      0
3496     TRAR4      0
3497      COMT      0
3498     RTN4R      0
3499     NOGOR      0
3500      SYN2      0
3501      EPN4      0
3502      EPNR      0
3503  KIAA0171      0
3504     SCZD1      0
3505      JAK3      0
3506      JAKL      0
3507      SOST      0
3508     GULOP      0
3509      GULO      0
3510       ATR      0
3511      FRP1      0
3512      SCKL      0
3513        TH      0
3514       TYH      0
3515    SCN2A1      0
3516     SCN2A      0
3517     ZAP70      0
3518       SRK      0
3519       STD      0
3520    PAPSS2      0
3521    ATPSK2      0
3522     IQCB1      0
3523     NPHP5      0
3524  KIAA0036      0
3525       SPR      0
3526    CASP12      0
3527  CASP12P1      0
3528     USP26      0
3529      IL7R      0
3530      CD3D      0
3531       T3D      0
3532      LHX4      0
3533      SBDS      0
3534       SDS      0
3535      NEU1      0
3536     SIAL1      0
3537      GPC3      0
3538      SDYS      0
3539     SGBS1      0
3540     ABCG5      0
3541     ABCG8      0
3542     NODAL      0
3543   ALDH3A2      0
3544    ALDH10      0
3545       SLS      0
3546     FALDH      0
3547      NAT2      0
3548      AAC2      0
3549  ARHGEF10      0
3550  KIAA0294      0
3551      TBX4      0
3552     DHCR7      0
3553      SLOS      0
3554      RAI1      0
3555      SMCR      0
3556     TIMP3      0
3557       SFD      0
3558      SACS      0
3559    ARSACS      0
3560     KIF5A      0
3561      NKHC      0
3562     SPG10      0
3563     HSPD1      0
3564     SPG13      0
3565     HSP60      0
3566     SPG3A      0
3567      SPG4      0
3568     SPAST      0
3569     NIPA1      0
3570      SPG6      0
3571       PGN      0
3572      SPG7      0
3573      CMAR      0
3574     CEBPE      0
3575      CRP1      0
3576     FOXP2      0
3577     SPCH1      0
3578    TNRC10      0
3579    CAGH44      0
3580      DAZL      0
3581      DAZH      0
3582    SPGYLA      0
3583      ANK1      0
3584      SPH2      0
3585     EPB42      0
3586      SMN1      0
3587      SMA1      0
3588      SMA2      0
3589      SMA3      0
3590      SMA4      0
3591   IGHMBP2      0
3592    SMUBP2      0
3593     CATF1      0
3594    SMARD1      0
3595    ATXN10      0
3596     SCA10      0
3597     ATXN1      0
3598      ATX1      0
3599      SCA1      0
3600   PPP2R2B      0
3601     PRKCG      0
3602      PKCC      0
3603      PKCG      0
3604     SCA14      0
3605     ATXN2      0
3606      ATX2      0
3607      SCA2      0
3608     SCA25      0
3609     FGF14      0
3610      FHF4      0
3611     SCA27      0
3612   PLEKHG4      0
3613     ATXN7      0
3614      SCA7      0
3615     OPCA3      0
3616      SCA8      0
3617      TDP1      0
3618     SHFM3      0
3619       DAC      0
3620      DLL3      0
3621     SCDO1      0
3622     MESP2      0
3623      AGC1      0
3624     CSPG1      0
3625     MSK16      0
3626      SEDK      0
3627     CHST3      0
3628      C6ST      0
3629     C6ST1      0
3630      SEDL      0
3631      SEDT      0
3632      ING1      0
3633 TNFRSF10B      0
3634       DR5      0
3635   TRAILR2      0
3636       NOG      0
3637      SYM1      0
3638     SYNS1      0
3639     HMGCR      0
3640    ZNF198      0
3641      SCLL      0
3642      RAMP      0
3643       FIM      0
3644     PDE4D      0
3645     DPDE3      0
3646     STRK1      0
3647      LIFR      0
3648      STWS      0
3649       SWS      0
3650      SJS2      0
3651     SSADH      0
3652        SI      0
3653    TSPYL1      0
3654     TSPYL      0
3655     SIDDT      0
3656      SUOX      0
3657      SOD3      0
3658     ABCA3      0
3659      ABC3      0
3660     FBLN1      0
3661    TNFSF6      0
3662   APT1LG1      0
3663      FASL      0
3664    DNASE1      0
3665      DNL1      0
3666     PDCD1      0
3667     SLEB2      0
3668       WHN      0
3669      DAD1      0
3670      WNT3      0
3671      INT4      0
3672     ZFPM2      0
3673      FOG2      0
3674       HBD      0
3675      LCRB      0
3676   SLC19A2      0
3677     THTR1      0
3678      THPO      0
3679      MGDF      0
3680     MPLLG      0
3681  FLJ14813      0
3682      THC2      0
3683       MPL      0
3684      TPOR      0
3685      MPLV      0
3686      HCF2      0
3687       HC2      0
3688  SERPIND1      0
3689       HRG      0
3690      PROC      0
3691  ADAMTS13      0
3692     VWFCP      0
3693       TTP      0
3694    MINPP1      0
3695    HIPER1      0
3696    GOLGA5      0
3697      RFG5      0
3698      PTC5      0
3699     NCOA4      0
3700      ELE1      0
3701      PTC3      0
3702      PCM1      0
3703      PTC4      0
3704     TIF1G      0
3705      RFG7      0
3706      PTC7      0
3707    TRIM24      0
3708      TIF1      0
3709     TIF1A      0
3710      PTC6      0
3711      THRB      0
3712     ERBA2      0
3713      THR1      0
3714      TRHR      0
3715       TBG      0
3716      MITF      0
3717      WS2A      0
3718   CACNA1C      0
3719  CACNL1A1      0
3720   CCHL1A1      0
3721        TS      0
3722    CYP2C9      0
3723     SALL1      0
3724     HSAL1      0
3725       TBS      0
3726    TALDO1      0
3727      TCN2      0
3728       TC2      0
3729    THRAP2      0
3730 PROSIT240      0
3731  TRAP240L      0
3732  KIAA1025      0
3733     TCOF1      0
3734      MFD1      0
3735    HS1BP3      0
3736  FLJ14249      0
3737      ETM2      0
3738     TRPS1      0
3739     ERCC3      0
3740       XPB      0
3741    TGF2H5      0
3742      TTDA      0
3743      TFB5      0
3744  C6orf175      0
3745     TTDN1      0
3746   C7orf11      0
3747      ABHS      0
3748     HADHB      0
3749     SPG20      0
3750       FAH      0
3751       TAT      0
3752       HPD      0
3753      TBX3      0
3754      TPH2      0
3755      NTPH      0
3756      APRT      0
3757      SANS      0
3758     USH1G      0
3759     USH3A      0
3760      USH3      0
3761       TEK      0
3762      TIE2      0
3763      VMCM      0
3764 SERPINA10      0
3765       ZPI      0
3766     CASQ2      0
3767      OAS1      0
3768      OIAS      0
3769    VKORC1      0
3770      VKOR      0
3771    VKCFD2      0
3772  FLJ00289      0
3773      GGCX      0
3774    ACADVL      0
3775     VLCAD      0
3776       VWF      0
3777     F8VWF      0
3778     SNAI2      0
3779      SLUG      0
3780      WS2D      0
3781   RAB3GAP      0
3782    WARBM1      0
3783      P130      0
3784  ADAMTS10      0
3785    RECQL2      0
3786     RECQ3      0
3787       WRN      0
3788       TKT      0
3789     KRT13      0
3790      KRT4      0
3791      CYK4      0
3792    POU6F2      0
3793      WTSL      0
3794       WT5      0
3795     ATP7B      0
3796       WND      0
3797   EIF2AK3      0
3798       PEK      0
3799      PERK      0
3800       WRS      0
3801       XDH      0
3802       XPA      0
3803       XPC      0
3804      XPCC      0
3805      DDB2      0
3806     ERCC4      0
3807       XPF      0
3808      POLH      0
3809       XPV      0
3810       XIC      0
3811       XCE      0
3812      XIST      0
3813      SXI1      0
3814     PEX14      0
3815       PXF      0
3816      HK33      0
3817  D1S2223E      0
3818     PEX19      0
3819     ABCD3      0
3820     PXMP1      0
3821     PMP70      0
3822     PEX16      0
3823      PEX3      0
# summary statistics for node attributes

summary(data.frame(name = network.stat %v% "vertex.names",
    totdegree = sna::degree(network.stat)))
     name             totdegree     
 Length:3823        Min.   : 0.000  
 Class :character   1st Qu.: 2.000  
 Mode  :character   Median : 4.000  
                    Mean   : 6.951  
                    3rd Qu.: 8.000  
                    Max.   :82.000  
## not getting names of nodes?????
# plotting a histogram

#plot a histogram: ggplot

network.nodes <- data.frame(name = network.stat %v% "vertex.names", degree = sort(sna::degree(network.stat), decreasing = T))

ggplot(network.nodes, aes(name, degree)) +
  geom_col() +
  labs(title = "Gene Distribution", x="Gene Name") + coord_flip()

#get network centralization score: statnet

# centralization(network.stat, g = NULL, degree, mode = "graph", diag = FALSE)
# summarizing the data after grouping the Gene type

network.nodes%>%
  group_by(name)%>%
  summarise_all(funs(mean, n()))
# A tibble: 3,823 x 3
   name    mean     n
   <chr>  <dbl> <int>
 1 A15        2     1
 2 A2M       20     1
 3 A4GALT    10     1
 4 AAA       44     1
 5 AAAS      44     1
 6 AAC2       0     1
 7 AACT      24     1
 8 AANAT      6     1
 9 AAS       46     1
10 AASS       4     1
# ... with 3,813 more rows

Reuse

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Citation

For attribution, please cite this work as

Kumar (2022, May 11). Data Analytics and Computational Social Science: The Human Disease -- Week 3. Retrieved from https://github.com/DACSS/dacss_course_website/posts/httpsrpubscomak64823895256/

BibTeX citation

@misc{kumar2022the,
  author = {Kumar, Abhinav},
  title = {Data Analytics and Computational Social Science: The Human Disease -- Week 3},
  url = {https://github.com/DACSS/dacss_course_website/posts/httpsrpubscomak64823895256/},
  year = {2022}
}